The IMOMM (Integrated Molecular Orbitals/Molecular Mechanics) approach for ligand-stabilized metal clusters. Comparison to full density functional calculations for the model thiolate cluster Cu13(SCH 2CH3)8

Alexander Genest, André Woiterski, Sven Krüger, Aleksey M. Shor, Notker Rösch

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Abstract

To validate the IMOMM (integrated molecular orbitals/molecular mechanics) method for ligand-stabilized transition metal clusters, we compare results of this combined quantum mechanical and molecular mechanical (QM/MM) approach, as implemented in the program ParaGauss (Kerdcharoen, T.; Birkenheuer, U.; Krüger, S.; Woiterski, A.; Rösch, N. Theor. Chem. Acc. 2003, 109, 285), to a full density functional (DF) treatment. For this purpose, we have chosen a model copper ethylthiolate cluster, Cu13(SCH 2CH3)8 in D4h, symmetry. The evaluation is based on 16 conformers of the cluster which exhibit single and bridging coordination of the ligands at the Cu13 cluster as well as various ligand orientations. For corresponding isomers, we obtained moderate deviations between QM and QM/MM results: 0.01-0.06 Å for pertinent bond lengths and up to ∼15° for bond angles. Ligand binding energies of the two approaches deviated less than 6 kcal/mol. The largest discrepancies between full DF and IMOMM results were found for isomers exhibiting short Cu-H and H-H contacts. We traced this back to the localization of different minima, reflecting the unequal performance of the DF and the force-field methods for nonbonding interactions. Thus, QM/MM results can be considered as more reliable because of the well-known limitations of standard exchange-correlation functionals for the description of nonbonding interactions for this class of systems.

Original languageEnglish
Pages (from-to)47-58
Number of pages12
JournalJournal of Chemical Theory and Computation
Volume2
Issue number1
DOIs
StatePublished - 2006

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