@inbook{613a6e02f56347a0a7f7a736f6f0855f,
title = "The Barley and Wheat Pan-Genomes",
abstract = "To unlock the genetic potential in crops, multi-genome comparisons are an essential tool. Decreasing costs and improved sequencing technologies have democratized plant genome sequencing and led to a vast increase in the amount of available reference sequences on the one hand and enabled the assembly of even the largest and most complex and repetitive crops genomes such as wheat and barley. These developments have led to the era of pan-genomics in recent years. Pan-genome projects enable the definition of the core and dispensable genome for various crop species as well as the analysis of structural and functional variation and hence offer unprecedented opportunities for exploring and utilizing the genetic basis of natural variation in crops. Comparing, analyzing, and visualizing these multiple reference genomes and their diversity requires powerful and specialized computational strategies and tools.",
keywords = "Annotation, Assembly, Cereals, Crops, Genes, Pan-genome, PAV, Polyploidy, Reference genome, Repeats, Sequencing",
author = "Nadia Kamal and Thomas Lux and Murukarthick Jayakodi and Georg Haberer and Heidrun Gundlach and Mayer, {Klaus F.X.} and Martin Mascher and Manuel Spannagl",
note = "Publisher Copyright: {\textcopyright} 2022, The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.",
year = "2022",
doi = "10.1007/978-1-0716-2067-0_7",
language = "English",
series = "Methods in Molecular Biology",
publisher = "Humana Press Inc.",
pages = "147--159",
booktitle = "Methods in Molecular Biology",
}