Species-aware DNA language models capture regulatory elements and their evolution

Keyphrases

• Regulatory Elements 100%
• Language Model 100%
• Evolutionary 16%
• Genome Sequencing 16%
• Sequence Representation 16%
• Information Integration 16%
• Sequence Alignment 16%
• Flexible Tool 16%
• Multispecies 16%
• Motif Discovery 16%
• Non-coding Sequence 16%
• Transcription Factor Binding 16%
• RNA-binding Protein 16%
• Conserved Regulatory Elements 16%
• Positional Constraints 16%
• Protein Motif 16%
• Evolutionary Distance 16%
• Higher Order Sequence 16%
• Scalable Tools 16%
• Gene Regulatory Programs 16%
• Gene Expression Prediction 16%

Biochemistry, Genetics and Molecular Biology

• Regulatory Element 100%
• Genome Sequencing 33%
• Locus Control Region 33%
• RNA-binding Protein 33%
• Gene Expression 33%
• Sequence Alignment 33%
• Protein Motif 33%
• Sequence Motif 33%
• RNA Transcription 33%
• Transcription Factors 33%