Software tools for MS-based quantitative proteomics: A brief overview

Simone Lemeer, Hannes Hahne, Fiona Pachl, Bernhard Kuster

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

30 Scopus citations

Abstract

Proteomics is turning more and more towards quantitative measurements of biological systems. This in turn has spurred the development of numerous experimental methods that enable such measurements. Vast quantities of mostly mass spectrometric data are often generated as a result which requires the use of software tools that turns raw data into useful quantitative information from which knowledge about the biological system can eventually be derived. This chapter gives a brief overview of available software tools for mass spectrometry based quantitative proteomics.

Original languageEnglish
Title of host publicationQuantitative Methods in Proteomics
EditorsMarcus Katrin
Pages489-499
Number of pages11
DOIs
StatePublished - 2012

Publication series

NameMethods in Molecular Biology
Volume893
ISSN (Print)1064-3745

Keywords

  • Label-free
  • Quantitative mass spectrometry
  • Software
  • Stable isotope labeling

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