Self-attention equipped graph convolutions for disease prediction

Anees Kazi, S. Arvind Krishna, Shayan Shekarforoush, Karsten Kortuem, Shadi Albarqouni, Nassir Navab

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

35 Scopus citations

Abstract

Multi-modal data comprising imaging (MRI, fMRI, PET, etc.) and non-imaging (clinical test, demographics, etc.) data can be collected together and used for disease prediction. Such diverse data gives complementary information about the patient's condition to make an informed diagnosis. A model capable of leveraging the individuality of each multi-modal data is required for better disease prediction. We propose a graph convolution based deep model which takes into account the distinctiveness of each element of the multi-modal data. We incorporate a novel self-attention layer, which weights every element of the demographic data by exploring its relation to the underlying disease. We demonstrate the superiority of our developed technique in terms of computational speed and performance when compared to state-of-the-art methods. Our method outperforms other methods with a significant margin.

Original languageEnglish
Title of host publicationISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging
PublisherIEEE Computer Society
Pages1896-1899
Number of pages4
ISBN (Electronic)9781538636411
DOIs
StatePublished - Apr 2019
Event16th IEEE International Symposium on Biomedical Imaging, ISBI 2019 - Venice, Italy
Duration: 8 Apr 201911 Apr 2019

Publication series

NameProceedings - International Symposium on Biomedical Imaging
Volume2019-April
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference16th IEEE International Symposium on Biomedical Imaging, ISBI 2019
Country/TerritoryItaly
CityVenice
Period8/04/1911/04/19

Keywords

  • Disease prediction
  • Graph Convolutions
  • Multi-modal

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