TY - GEN
T1 - Reinforced redetection of landmark in pre- and post-operative brain scan using anatomical guidance for image alignment
AU - Waldmannstetter, Diana
AU - Navarro, Fernando
AU - Wiestler, Benedikt
AU - Kirschke, Jan S.
AU - Sekuboyina, Anjany
AU - Molero, Ester
AU - Menze, Bjoern H.
N1 - Publisher Copyright:
© Springer Nature Switzerland AG 2020.
PY - 2020
Y1 - 2020
N2 - Re-identifying locations of interest in pre- and post-operative images is a hard identification problem, as the anatomical landscape changes dramatically due to tumor resection and tissue displacement. Classical image registration techniques oftentimes fail in vicinity of the tumor, where the enclosing structures are massively altered from one scan to another. Still, locations nearby the tumor or the resection cavity are the most relevant for evaluating tumor progression patterns and for comparing pre- and post-operative radiomic signatures. We address this issue by exploring a Reinforcement Learning (RL) approach. An artificial agent is self-taught to find the optimal path towards a target driven by a feedback signal from the environment. Incorporating anatomical guidance, we restrict the agent’s search space to surgery-unaffected structures only. By defining landmarks for each patient individually, we aim to obtain a patient-specific representation of its differential radiomic features across different time points for enhancing image alignment. Estimated landmarks reach a remarkable mean distance error around 3 mm. In addition, they show a high agreement with expert annotations on a challenging dataset of MR scans from the brain before and after tumor resection.
AB - Re-identifying locations of interest in pre- and post-operative images is a hard identification problem, as the anatomical landscape changes dramatically due to tumor resection and tissue displacement. Classical image registration techniques oftentimes fail in vicinity of the tumor, where the enclosing structures are massively altered from one scan to another. Still, locations nearby the tumor or the resection cavity are the most relevant for evaluating tumor progression patterns and for comparing pre- and post-operative radiomic signatures. We address this issue by exploring a Reinforcement Learning (RL) approach. An artificial agent is self-taught to find the optimal path towards a target driven by a feedback signal from the environment. Incorporating anatomical guidance, we restrict the agent’s search space to surgery-unaffected structures only. By defining landmarks for each patient individually, we aim to obtain a patient-specific representation of its differential radiomic features across different time points for enhancing image alignment. Estimated landmarks reach a remarkable mean distance error around 3 mm. In addition, they show a high agreement with expert annotations on a challenging dataset of MR scans from the brain before and after tumor resection.
KW - Brain tumor
KW - Differential radiomics
KW - Image alignment
KW - Image registration
KW - Reinforcement Learning
UR - http://www.scopus.com/inward/record.url?scp=85087018732&partnerID=8YFLogxK
U2 - 10.1007/978-3-030-50120-4_8
DO - 10.1007/978-3-030-50120-4_8
M3 - Conference contribution
AN - SCOPUS:85087018732
SN - 9783030501198
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 81
EP - 90
BT - Biomedical Image Registration - 9th International Workshop, WBIR 2020, Proceedings
A2 - Spiclin, Ziga
A2 - McClelland, Jamie
A2 - Kybic, Jan
A2 - Goksel, Orcun
PB - Springer
T2 - 9th International Workshop on Biomedical Image Registration, WBIR 2020
Y2 - 1 December 2020 through 2 December 2020
ER -