Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective

  • Ahmad B. Qasim
  • , Ivan Ezhov
  • , Suprosanna Shit
  • , Oliver Schoppe
  • , Johannes C. Paetzold
  • , Anjany Sekuboyina
  • , Florian Kofler
  • , Jana Lipkova
  • , Hongwei Li
  • , Bjoern Menze

Research output: Contribution to journalConference articlepeer-review

42 Scopus citations

Abstract

Exploiting learning algorithms under scarce data regimes is a limitation and a reality of the medical imaging field. In an attempt to mitigate the problem, we propose a data augmentation protocol based on generative adversarial networks. We condition the networks at a pixel-level (segmentation mask) and at a global-level information (acquisition environment or lesion type). Such conditioning provides immediate access to the image-label pairs while controlling global class specific appearance of the synthesized images. To stimulate synthesis of the features relevant for the segmentation task, an additional passive player in a form of segmentor is introduced into the adversarial game. We validate the approach on two medical datasets: BraTS, ISIC. By controlling the class distribution through injection of synthetic images into the training set we achieve control over the accuracy levels of the datasets’ classes.

Original languageEnglish
Pages (from-to)655-668
Number of pages14
JournalProceedings of Machine Learning Research
Volume121
StatePublished - 2020
Event3rd Conference on Medical Imaging with Deep Learning, MIDL 2020 - Virtual, Online, Canada
Duration: 6 Jul 20208 Jul 2020

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