Red-GAN: Attacking class imbalance via conditioned generation. Yet another medical imaging perspective

Ahmad B. Qasim, Ivan Ezhov, Suprosanna Shit, Oliver Schoppe, Johannes C. Paetzold, Anjany Sekuboyina, Florian Kofler, Jana Lipkova, Hongwei Li, Bjoern Menze

Research output: Contribution to journalConference articlepeer-review

38 Scopus citations

Abstract

Exploiting learning algorithms under scarce data regimes is a limitation and a reality of the medical imaging field. In an attempt to mitigate the problem, we propose a data augmentation protocol based on generative adversarial networks. We condition the networks at a pixel-level (segmentation mask) and at a global-level information (acquisition environment or lesion type). Such conditioning provides immediate access to the image-label pairs while controlling global class specific appearance of the synthesized images. To stimulate synthesis of the features relevant for the segmentation task, an additional passive player in a form of segmentor is introduced into the adversarial game. We validate the approach on two medical datasets: BraTS, ISIC. By controlling the class distribution through injection of synthetic images into the training set we achieve control over the accuracy levels of the datasets’ classes.

Original languageEnglish
Pages (from-to)655-668
Number of pages14
JournalProceedings of Machine Learning Research
Volume121
StatePublished - 2020
Event3rd Conference on Medical Imaging with Deep Learning, MIDL 2020 - Virtual, Online, Canada
Duration: 6 Jul 20208 Jul 2020

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