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Multi-Task Multi-Domain Learning for Digital Staining and Classification of Leukocytes

  • Agnieszka Tomczak
  • , Slobodan Ilic
  • , Gaby Marquardt
  • , Thomas Engel
  • , Frank Forster
  • , Nassir Navab
  • , Shadi Albarqouni
  • Siemens AG
  • Technical University of Munich

Research output: Contribution to journalArticlepeer-review

25 Scopus citations

Abstract

This paper addresses digital staining and classification of the unstained white blood cell images obtained with a differential contrast microscope. We have data coming from multiple domains that are partially labeled and partially matching across the domains. Using unstained images removes time-consuming staining procedures and could facilitate and automatize comprehensive diagnostics. To this aim, we propose a method that translates unstained images to realistically looking stained images preserving the inter-cellular structures, crucial for the medical experts to perform classification. We achieve better structure preservation by adding auxiliary tasks of segmentation and direct reconstruction. Segmentation enforces that the network learns to generate correct nucleus and cytoplasm shape, while direct reconstruction enforces reliable translation between the matching images across domains. Besides, we build a robust domain agnostic latent space by injecting the target domain label directly to the generator, i.e., bypassing the encoder. It allows the encoder to extract features independently of the target domain and enables an automated domain invariant classification of the white blood cells. We validated our method on a large dataset composed of leukocytes of 24 patients, achieving state-of-The-Art performance on both digital staining and classification tasks.

Original languageEnglish
Pages (from-to)2897-2910
Number of pages14
JournalIEEE Transactions on Medical Imaging
Volume40
Issue number10
DOIs
StatePublished - 1 Oct 2021

Keywords

  • Microscopy imaging
  • blood cells
  • generative adversarial networks
  • hematology
  • image-To-image translation

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