Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database

Yasmina Al Khalil, Edoardo A. Becherucci, Jan S. Kirschke, Dimitrios C. Karampinos, Marcel Breeuwer, Thomas Baum, Nico Sollmann

Research output: Contribution to journalArticlepeer-review

9 Scopus citations

Abstract

Magnetic resonance imaging (MRI) is widely utilized for diagnosing and monitoring of spinal disorders. For a number of applications, particularly those related to quantitative MRI, an essential step towards achieving reliable and objective measurements is the segmentation of the examined structures. Performed manually, such process is time-consuming and prone to errors, posing a bottleneck to its clinical applicability. A more efficient analysis would be achieved by automating a segmentation process. However, routine spine MRI acquisitions pose several challenges for achieving robust and accurate segmentations, due to varying MRI acquisition characteristics occurring in data acquired from different sites. Moreover, heterogeneous annotated datasets, collected from multiple scanners with different pulse sequence protocols, are limited. Thus, we present a manually segmented lumbar spine MRI database containing a wide range of data obtained from multiple scanners and pulse sequences, with segmentations of lumbar vertebral bodies and intervertebral discs. The database is intended for the use in developing and testing of automated lumbar spine segmentation algorithms in multi-domain scenarios.

Original languageEnglish
Article number97
JournalScientific Data
Volume9
Issue number1
DOIs
StatePublished - Dec 2022

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