Improved Post-hoc Probability Calibration for Out-of-Domain MRI Segmentation

Cheng Ouyang, Shuo Wang, Chen Chen, Zeju Li, Wenjia Bai, Bernhard Kainz, Daniel Rueckert

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

1 Scopus citations

Abstract

Probability calibration for deep models is highly desirable in safety-critical applications such as medical imaging. It makes output probabilities of deep networks interpretable, by aligning prediction probability with the actual accuracy in test data. In image segmentation, well-calibrated probabilities allow radiologists to identify regions where model-predicted segmentations are unreliable. These unreliable predictions often occur to out-of-domain (OOD) images that are caused by imaging artifacts or unseen imaging protocols. Unfortunately, most previous calibration methods for image segmentation perform sub-optimally on OOD images. To reduce the calibration error when confronted with OOD images, we propose a novel post-hoc calibration model. Our model leverages the pixel susceptibility against perturbations at the local level, and the shape prior information at the global level. The model is tested on cardiac MRI segmentation datasets that contain unseen imaging artifacts and images from an unseen imaging protocol. We demonstrate reduced calibration errors compared with the state-of-the-art calibration algorithm.

Original languageEnglish
Title of host publicationUncertainty for Safe Utilization of Machine Learning in Medical Imaging - 4th International Workshop, UNSURE 2022, Held in Conjunction with MICCAI 2022, Proceedings
EditorsCarole H. Sudre, Carole H. Sudre, Christian F. Baumgartner, Adrian Dalca, Adrian Dalca, William M. Wells III, Chen Qin, Ryutaro Tanno, Koen Van Leemput, Koen Van Leemput, William M. Wells III
PublisherSpringer Science and Business Media Deutschland GmbH
Pages59-69
Number of pages11
ISBN (Print)9783031167485
DOIs
StatePublished - 2022
Event4th Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2022, held in conjunction with 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022 - Singapore, Singapore
Duration: 18 Sep 202218 Sep 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume13563 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference4th Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2022, held in conjunction with 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022
Country/TerritorySingapore
CitySingapore
Period18/09/2218/09/22

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