HeatMapViewer: Interactive display of 2D data in biology

Guy Yachdav; Maximilian Hecht; Metsada Pasmanik-Chor; Adva Yeheskel; Burkhard Rost

doi:10.12688/f1000research.3-48.v1

HeatMapViewer: Interactive display of 2D data in biology

Guy Yachdav, Maximilian Hecht, Metsada Pasmanik-Chor, Adva Yeheskel, Burkhard Rost

Informatics 12 - Chair of Bioinformatics

Research output: Contribution to journal › Article › peer-review

17 Scopus citations

Abstract

The HeatMapViewer is a BioJS component that lays-out and renders two-dimensional (2D) plots or heat maps that are ideally suited to visualize matrix formatted data in biology such as for the display of microarray experiments or the outcome of mutational studies and the study of SNP-like sequence variants. It can be easily integrated into documents and provides a powerful, interactive way to visualize heat maps in web applications. The software uses a scalable graphics technology that adapts the visualization component to any required resolution, a useful feature for a presentation with many different data-points. The component can be applied to present various biological data types. Here, we present two such cases - showing gene expression data and visualizing mutability landscape analysis. Availability: https://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.7706.

Original language	English
Article number	48.v1
Journal	F1000Research
Volume	3
DOIs	https://doi.org/10.12688/f1000research.3-48.v1
State	Published - 13 Feb 2014

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HeatMapViewer: Interactive display of 2D data in biology

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