Groupwise combined segmentation and registration for atlas construction

Kanwal K. Bhatia; Paul Aljabar; James P. Boardman; Latha Srinivasan; Maria Murgasova; Serena J. Counsell; Mary A. Rutherford; Jo Hajnal; A. David Edwards; Daniel Rueckert

doi:10.1007/978-3-540-75757-3_65

Groupwise combined segmentation and registration for atlas construction

Kanwal K. Bhatia, Paul Aljabar, James P. Boardman, Latha Srinivasan, Maria Murgasova, Serena J. Counsell, Mary A. Rutherford, Jo Hajnal, A. David Edwards, Daniel Rueckert

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

36 Scopus citations

Abstract

The creation of average anatomical atlases has been a growing area of research in recent years. It is of increased value to construct representations of, not only intensity atlases, but also their segmentation into required tissues or structures. This paper presents novel groupwise combined segmentation and registration approaches, which aim to simultaneously improve both the alignment of intensity images to their average shape, as well as the segmentations of structures in the average space. An iterative EM framework is used to build average 3D MR atlases of populations for which prior atlases do not currently exist: preterm infants at one- and two-years old. These have been used to quantify the growth of tissues occurring between these ages.

Original language	English
Title of host publication	Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings
Publisher	Springer Verlag
Pages	532-540
Number of pages	9
Edition	PART 1
ISBN (Print)	9783540757566
DOIs	https://doi.org/10.1007/978-3-540-75757-3_65
State	Published - 2007
Externally published	Yes
Event	10th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2007 - Brisbane, Australia Duration: 29 Oct 2007 → 2 Nov 2007

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Number	PART 1
Volume	4791 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	10th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2007
Country/Territory	Australia
City	Brisbane
Period	29/10/07 → 2/11/07

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10.1007/978-3-540-75757-3_65

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Bhatia, K. K., Aljabar, P., Boardman, J. P., Srinivasan, L., Murgasova, M., Counsell, S. J., Rutherford, M. A., Hajnal, J., Edwards, A. D., & Rueckert, D. (2007). Groupwise combined segmentation and registration for atlas construction. In Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings (PART 1 ed., pp. 532-540). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4791 LNCS, No. PART 1). Springer Verlag. https://doi.org/10.1007/978-3-540-75757-3_65

Bhatia, Kanwal K. ; Aljabar, Paul ; Boardman, James P. et al. / Groupwise combined segmentation and registration for atlas construction. Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings. PART 1. ed. Springer Verlag, 2007. pp. 532-540 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); PART 1).

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abstract = "The creation of average anatomical atlases has been a growing area of research in recent years. It is of increased value to construct representations of, not only intensity atlases, but also their segmentation into required tissues or structures. This paper presents novel groupwise combined segmentation and registration approaches, which aim to simultaneously improve both the alignment of intensity images to their average shape, as well as the segmentations of structures in the average space. An iterative EM framework is used to build average 3D MR atlases of populations for which prior atlases do not currently exist: preterm infants at one- and two-years old. These have been used to quantify the growth of tissues occurring between these ages.",

author = "Bhatia, {Kanwal K.} and Paul Aljabar and Boardman, {James P.} and Latha Srinivasan and Maria Murgasova and Counsell, {Serena J.} and Rutherford, {Mary A.} and Jo Hajnal and Edwards, {A. David} and Daniel Rueckert",

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doi = "10.1007/978-3-540-75757-3_65",

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booktitle = "Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings",

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Bhatia, KK, Aljabar, P, Boardman, JP, Srinivasan, L, Murgasova, M, Counsell, SJ, Rutherford, MA, Hajnal, J, Edwards, AD & Rueckert, D 2007, Groupwise combined segmentation and registration for atlas construction. in Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings. PART 1 edn, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), no. PART 1, vol. 4791 LNCS, Springer Verlag, pp. 532-540, 10th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2007, Brisbane, Australia, 29/10/07. https://doi.org/10.1007/978-3-540-75757-3_65

Groupwise combined segmentation and registration for atlas construction. / Bhatia, Kanwal K.; Aljabar, Paul; Boardman, James P. et al.
Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings. PART 1. ed. Springer Verlag, 2007. p. 532-540 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4791 LNCS, No. PART 1).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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Bhatia KK, Aljabar P, Boardman JP, Srinivasan L, Murgasova M, Counsell SJ et al. Groupwise combined segmentation and registration for atlas construction. In Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings. PART 1 ed. Springer Verlag. 2007. p. 532-540. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); PART 1). doi: 10.1007/978-3-540-75757-3_65

Groupwise combined segmentation and registration for atlas construction

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