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GAT-based Concentration Prediction for Random Microfluidic Mixers with Multiple Input Flow Rates

  • Tsinghua University
  • University of Science and Technology Beijing
  • Chinese University of Hong Kong

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Microfluidic biochips have emerged with significant promise and versatility in automating a variety of biochemical protocols. Accurate preparation of fluid samples with microfluidic mixers is an essential component of these protocols, where concentration prediction and generation are critical. Recently, machine learning models have been adopted in concentration prediction, which demonstrate great potential in enhancing the efficiency and scalability over the traditional finite element analysis (FEA) methods. However, the state-of-the-art machine learning-based method can only predict the concentration of microfluidic mixers with fixed input flow rates, but suffers poor prediction accuracy for multiple input flow rates. To address this issue, this paper proposes a new concentration prediction method based on the graph attention networks (GAT). By modeling each channel of the mixer as a graph node in a GAT, the proposed method efficiently and accurately predicts the generated concentration of random microfluidic mixers with multiple input flow rates. Experimental results show that compared with the state-of-the-art method, the proposed GAT-based simulation method obtains a reduction of 85% in terms of errors of predicted concentration, which validates the effectiveness of the proposed GAT model.

Original languageEnglish
Title of host publicationGLSVLSI 2023 - Proceedings of the Great Lakes Symposium on VLSI 2023
PublisherAssociation for Computing Machinery
Pages483-488
Number of pages6
ISBN (Electronic)9798400701252
DOIs
StatePublished - 5 Jun 2023
Event33rd Great Lakes Symposium on VLSI, GLSVLSI 2023 - Knoxville, United States
Duration: 5 Jun 20237 Jun 2023

Publication series

NameProceedings of the ACM Great Lakes Symposium on VLSI, GLSVLSI

Conference

Conference33rd Great Lakes Symposium on VLSI, GLSVLSI 2023
Country/TerritoryUnited States
CityKnoxville
Period5/06/237/06/23

Keywords

  • graph attention network
  • microfluidic biochips
  • sample preparation

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