Feedback-driven design of normalization techniques for biological images using fuzzy formulation of a priori knowledge

Arif Ul Maula Khan, Markus Reischl, Brigitte Schweitzer, Carsten Weiss, Ralf Mikut

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

5 Scopus citations

Abstract

In digital imaging, a normalization procedure is an important step for an efficient and meaningful analysis of any random image dataset. The original intensity information in a digital image is mostly distorted due to imperfect acquisition conditions resulting in the shading phenomenon. Additionally, the high contrast of gray values present in an image also imparts a bias to retrieved gray values. Consequently, image processing goals such as segmentation and cell classification are adversely affected by aforementioned factors. In many microscopic imaging applications, retrospective shading correction methods are more commonly used as opposed to prospective methods in order to remove unwanted shading effects. The objectives of a normalization process, for one, can be rescaling of pixel values to a desired range while disregarding outliers and noisy background pixels. To counter shading effects, robust normalization techniques based on the adaptation of normalization parameters should be devised. We propose a feedback-based automatic image normalization technique that incorporates the evaluation criterion for its effectiveness based on image processing goals such as segmentation. Such a technique employs surface fitting of the available image pixel values to structures of a given family of function (such as polynomials) describing the spatial intensity variation of that image. It incorporates fuzzy formulation of criteria for normalization evaluation as an internal consistency check, while including post-segmentation results based on a priori segmentation knowledge at the same time. Results from a biological dataset consisting of images showing normal and dying cells are included to elucidate the effectiveness of the proposed scheme by automatically adapting normalization parameters.

Original languageEnglish
Title of host publicationComputational Intelligence in Intelligent Data Analysis
PublisherSpringer Verlag
Pages167-178
Number of pages12
ISBN (Print)9783642323775
DOIs
StatePublished - 2013
Externally publishedYes

Publication series

NameStudies in Computational Intelligence
Volume445
ISSN (Print)1860-949X

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