Feature Extraction by Image Transformations for Cell Image Classification

Stefan Röhrl, Franziska Steinmetz, Philipp Paukner, Manuel Lengl, Simon Schumann, David Fresacher, Christian Klenk, Dominik Heim, Martin Knopp, Katja Peschke, Maximilian Reichert, Oliver Hayden, Klaus Diepold

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

When it comes to decision-making in the medical context, opaque black box models, as accurate as they may be, have still not caught on in clinical practice. To present an alternative to the ever-growing convolutional neural networks, in this paper, we focus on classical image transformations, which are used in established compression methods. Using the example of modern high-throughput cytology by means of label-free quantitative phase microscopy, we want to evaluate the transformed cell features using comprehensible classifiers. We can show that the resulting transparent pipelines are roughly comparable to previous work using classical or black box models. The optimized methods generalize somewhat worse on unknown cells and outliers but represent a good trade-off between transparency and performance.

Original languageEnglish
Title of host publicationProceedings - 2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024
EditorsMario Cannataro, Huiru Zheng, Lin Gao, Jianlin Cheng, Joao Luis de Miranda, Ester Zumpano, Xiaohua Hu, Young-Rae Cho, Taesung Park
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages5073-5080
Number of pages8
ISBN (Electronic)9798350386226
DOIs
StatePublished - 2024
Event2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024 - Lisbon, Portugal
Duration: 3 Dec 20246 Dec 2024

Publication series

NameProceedings - 2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024

Conference

Conference2024 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2024
Country/TerritoryPortugal
CityLisbon
Period3/12/246/12/24

Keywords

  • Blood Cell Analysis
  • Image Transforms
  • Pancreatic Cancer
  • Quantitative Phase Imaging

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