TY - JOUR
T1 - DroughtDB
T2 - An expert-curated compilation of plant drought stress genes and their homologs in nine species
AU - Alter, Svenja
AU - Bader, Kai C.
AU - Spannagl, Manuel
AU - Wang, Yu
AU - Bauer, Eva
AU - Schön, Chris Carolin
AU - Mayer, Klaus F.X.
N1 - Publisher Copyright:
© The Author(s) 2015. Published by Oxford University Press.
PY - 2015
Y1 - 2015
N2 - Plants are sessile and therefore exposed to a number of biotic and abiotic stresses. Drought is the major abiotic stress restricting plant growth worldwide. A number of genes involved in drought stress response have already been characterized, mainly in the model species Arabidopsis thaliana and Oryza sativa. However, with the aim to produce drought tolerant crop varieties, it is of importance to identify the respective orthologs for each species. We have developed DroughtDB, a manually curated compilation of molecularly characterized genes that are involved in drought stress response. DroughtDB includes information about the originally identified gene, its physiological and/or molecular function and mutant phenotypes and provides detailed information about computed orthologous genes in nine model and crop plant species including maize and barley. All identified orthologs are interlinked with the respective reference entry in MIPS/PGSB PlantsDB, which allows retrieval of additional information like genome context and sequence information. Thus, DroughtDB is a valuable resource and information tool for researchers working on drought stress and will facilitate the identification, analysis and characterization of genes involved in drought stress tolerance in agriculturally important crop plants.
AB - Plants are sessile and therefore exposed to a number of biotic and abiotic stresses. Drought is the major abiotic stress restricting plant growth worldwide. A number of genes involved in drought stress response have already been characterized, mainly in the model species Arabidopsis thaliana and Oryza sativa. However, with the aim to produce drought tolerant crop varieties, it is of importance to identify the respective orthologs for each species. We have developed DroughtDB, a manually curated compilation of molecularly characterized genes that are involved in drought stress response. DroughtDB includes information about the originally identified gene, its physiological and/or molecular function and mutant phenotypes and provides detailed information about computed orthologous genes in nine model and crop plant species including maize and barley. All identified orthologs are interlinked with the respective reference entry in MIPS/PGSB PlantsDB, which allows retrieval of additional information like genome context and sequence information. Thus, DroughtDB is a valuable resource and information tool for researchers working on drought stress and will facilitate the identification, analysis and characterization of genes involved in drought stress tolerance in agriculturally important crop plants.
UR - http://www.scopus.com/inward/record.url?scp=84937496273&partnerID=8YFLogxK
U2 - 10.1093/database/bav046
DO - 10.1093/database/bav046
M3 - Article
C2 - 25979979
AN - SCOPUS:84937496273
SN - 1758-0463
VL - 2015
JO - Database
JF - Database
M1 - bav046
ER -