CRONOS: The cross-reference navigation server

Brigitte Waegele, Irmtraud Dunger-Kaltenbach, Gisela Fobo, Corinna Montrone, H. Werner Mewes, Andreas Ruepp

Research output: Contribution to journalArticlepeer-review

15 Scopus citations

Abstract

Cross-mapping of gene and protein identifiers between different databases is a tedious and time-consuming task. To overcome this, we developed CRONOS, a cross-reference server that contains entries from five mammalian organisms presented by major gene and protein information resources. Sequence similarity analysis of the mapped entries shows that the cross-references are highly accurate. In total, up to 18 different identifier types can be used for identification of cross-references. The quality of the mapping could be improved substantially by exclusion of ambiguous gene and protein names which were manually validated. Organism-specific lists of ambiguous terms, which are valuable for a variety of bioinformatics applications like text mining are available for download.

Original languageEnglish
Pages (from-to)141-143
Number of pages3
JournalBioinformatics
Volume25
Issue number1
DOIs
StatePublished - Jan 2009

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