BrainProfileDB - A platform for integration of functional genomics data

Johannes Schuchhardt; Alexander Glintschert; Daniela Hartl; Martin Irmler; Johannes Beckers; Christian Stephan; Katrin Marcus; Joachim Klose; Helmut E. Meyer; Arif Malik

doi:10.1002/pmic.200700743

BrainProfileDB - A platform for integration of functional genomics data

Johannes Schuchhardt
, Alexander Glintschert
, Daniela Hartl
, Martin Irmler
, Johannes Beckers
, Christian Stephan
, Katrin Marcus
, Joachim Klose
, Helmut E. Meyer
, Arif Malik

Life Sciences

MicroDiscovery GmbH
Charité – Universitätsmedizin Berlin
Helmholtz Zentrum München German Research Center for Environmental Health
Ruhr University Bochum

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

Abstract

BrainProfileDB is a database system for integrating large sets of high throughput functional genomics data of the Human Brain Proteome Project (HBPP). Within HBPP (http://www.smp-proteomics.de/) the molecular pathology of neurodegenerative diseases is investigated, using complementary methods from transcriptomics, proteomics, toponomics and interaction measurements. Aim of the database system is to provide a broad spectrum of scientific users joined in the consortium with a practical integrated view on their data. Employing appropriate mapping techniques and levels of data representation the user is relieved from technical details of gene identification or experimental measurement technique.

Original language	English
Pages (from-to)	1162-1164
Number of pages	3
Journal	Proteomics
Volume	8
Issue number	6
DOIs	https://doi.org/10.1002/pmic.200700743
State	Published - Mar 2008

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Keywords

Data analysis
Functional genomics database
High-throughput data management
Integrating genomics and proteomics
Neurodegenerative diseases

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10.1002/pmic.200700743

Cite this

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title = "BrainProfileDB - A platform for integration of functional genomics data",

abstract = "BrainProfileDB is a database system for integrating large sets of high throughput functional genomics data of the Human Brain Proteome Project (HBPP). Within HBPP (http://www.smp-proteomics.de/) the molecular pathology of neurodegenerative diseases is investigated, using complementary methods from transcriptomics, proteomics, toponomics and interaction measurements. Aim of the database system is to provide a broad spectrum of scientific users joined in the consortium with a practical integrated view on their data. Employing appropriate mapping techniques and levels of data representation the user is relieved from technical details of gene identification or experimental measurement technique.",

keywords = "Data analysis, Functional genomics database, High-throughput data management, Integrating genomics and proteomics, Neurodegenerative diseases",

author = "Johannes Schuchhardt and Alexander Glintschert and Daniela Hartl and Martin Irmler and Johannes Beckers and Christian Stephan and Katrin Marcus and Joachim Klose and Meyer, \{Helmut E.\} and Arif Malik",

year = "2008",

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doi = "10.1002/pmic.200700743",

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AU - Schuchhardt, Johannes

AU - Glintschert, Alexander

AU - Hartl, Daniela

AU - Irmler, Martin

AU - Beckers, Johannes

AU - Stephan, Christian

AU - Marcus, Katrin

AU - Klose, Joachim

AU - Meyer, Helmut E.

AU - Malik, Arif

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KW - Data analysis

KW - Functional genomics database

KW - High-throughput data management

KW - Integrating genomics and proteomics

KW - Neurodegenerative diseases

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SP - 1162

EP - 1164

JO - Proteomics

JF - Proteomics

IS - 6

ER -

BrainProfileDB - A platform for integration of functional genomics data

Abstract

UN SDGs

Keywords

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