BAT (Berry Analysis Tool): A high-throughput image interpretation tool to acquire the number, diameter, and volume of grapevine berries

A. Kicherer, R. Roscher, K. Herzog, S. Šimon, W. Förstner, R. Töpfer

Research output: Contribution to journalArticlepeer-review

33 Scopus citations

Abstract

QTL-analysis (quantitative trait loci) and marker development rely on efficient phenotyping techniques. Objectivity and precision of a phenotypic data evaluation is crucial but time consuming. In the present study a high-throughput image interpretation tool was developed to acquire automatically number, size, and volume of grape berries from RGB (red-green-blue) images. Individual berries of one cluster were placed on a black construction (300 x 300 mm) to take a RGB image from the top. The image interpretation of one dataset with an arbitrary number of images runs automatically using the BAT (Berry-Analysis-Tool) developed in MATLAB. For validation of results, the number of berries was counted and their size was measured using a digital calliper. A measuring cylinder was used to determine reliably the berry volume by displacement of water. All placed berries could be counted by BAT 100 % correctly. Manual ratings compared with BAT ratings showed strong correlation of r = 0.96 for mean berry diameter/image and r = 0.98 for cluster volume.

Original languageEnglish
Pages (from-to)129-135
Number of pages7
JournalVitis
Volume52
Issue number3
StatePublished - 2013
Externally publishedYes

Keywords

  • Berry morphology
  • Grapevine berry size
  • HT-phenotyping
  • Image interpretation

Fingerprint

Dive into the research topics of 'BAT (Berry Analysis Tool): A high-throughput image interpretation tool to acquire the number, diameter, and volume of grapevine berries'. Together they form a unique fingerprint.

Cite this