TY - JOUR
T1 - Automated Design for Multi-Organ-on-Chip Geometries
AU - Emmerich, Maria
AU - Ebner, Philipp
AU - Wille, Robert
N1 - Publisher Copyright:
© 1982-2012 IEEE.
PY - 2024
Y1 - 2024
N2 - Multi-Organs-on-Chips (multi-OoCs) represent human or other animal physiology on a chip - providing testing platforms for the pharmaceutical, cosmetic, and chemical industries. They are composed of miniaturized organ tissues (so-called organ modules) that are connected via a microfluidic channel network and, by this, represent organ functionalities and their interactions on-chip. The design of these multi-OoC geometries, however, requires a sophisticated orchestration of numerous aspects, such as the size of organ modules, the required shear stress on membranes and subsequently the flow rate, the dimensions and geometry of channels, pump pressures, etc. Mastering all this constitutes a non-trivial design task for which, unfortunately, no automatic support exists yet. In this work, we propose a design automation solution for multi-OoC geometries. To this end, we review the respective design steps and derive a corresponding formal design specification from them. Based on that, we then propose an automatic design tool, which generates a design of the desired device and exports it in a fashion that is ready for subsequent simulation or fabrication. The open-source tool and a step-by-step tutorial are available at https://github.com/cda-tum/mmft-ooc-designer. Evaluations (inspired by real-world use cases and confirmed by CFD simulations as well as a fabrication process) demonstrate the applicability and validity of the proposed approach.
AB - Multi-Organs-on-Chips (multi-OoCs) represent human or other animal physiology on a chip - providing testing platforms for the pharmaceutical, cosmetic, and chemical industries. They are composed of miniaturized organ tissues (so-called organ modules) that are connected via a microfluidic channel network and, by this, represent organ functionalities and their interactions on-chip. The design of these multi-OoC geometries, however, requires a sophisticated orchestration of numerous aspects, such as the size of organ modules, the required shear stress on membranes and subsequently the flow rate, the dimensions and geometry of channels, pump pressures, etc. Mastering all this constitutes a non-trivial design task for which, unfortunately, no automatic support exists yet. In this work, we propose a design automation solution for multi-OoC geometries. To this end, we review the respective design steps and derive a corresponding formal design specification from them. Based on that, we then propose an automatic design tool, which generates a design of the desired device and exports it in a fashion that is ready for subsequent simulation or fabrication. The open-source tool and a step-by-step tutorial are available at https://github.com/cda-tum/mmft-ooc-designer. Evaluations (inspired by real-world use cases and confirmed by CFD simulations as well as a fabrication process) demonstrate the applicability and validity of the proposed approach.
KW - design automation
KW - microfluidics
KW - microphysiological system
KW - multi-organ
KW - organ-on-chip
KW - physiological perfusion
KW - shear stress
UR - http://www.scopus.com/inward/record.url?scp=85210760907&partnerID=8YFLogxK
U2 - 10.1109/TCAD.2024.3509795
DO - 10.1109/TCAD.2024.3509795
M3 - Article
AN - SCOPUS:85210760907
SN - 0278-0070
JO - IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems
JF - IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems
ER -