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Klaus Mayer

Prof. Dr. rer. nat.

 https://orcid.org/0000-0001-6484-1077
1996 …2025

Research activity per year

Search results

  • 2025

    A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity

    Guo, W., Schreiber, M., Marosi, V. B., Bagnaresi, P., Jørgensen, M. E., Braune, K. B., Chalmers, K., Chapman, B., Dang, V., Dockter, C., Fiebig, A., Fincher, G. B., Fricano, A., Fuller, J., Haaning, A., Haberer, G., Himmelbach, A., Jayakodi, M., Jia, Y. & Kamal, N. & 34 others, Langridge, P., Li, C., Lu, Q., Lux, T., Mascher, M., Mayer, K. F. X., McCallum, N., Milne, L., Muehlbauer, G. J., Nielsen, M. T. S., Padmarasu, S., Pedas, P. R., Pillen, K., Pozniak, C., Rasmussen, M. W., Sato, K., Schmutzer, T., Scholz, U., Schüler, D., Šimková, H., Skadhauge, B., Stein, N., Thomsen, N. W., Voss, C., Wang, P., Wonneberger, R., Zhang, X. Q., Zhang, G., Cattivelli, L., Spannagl, M., Bayer, M., Simpson, C., Zhang, R. & Waugh, R., 2025, (Accepted/In press) In: Nature Genetics. 129.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    4 Scopus citations

  • Date palm diverts organic solutes for root osmotic adjustment and protects leaves from oxidative damage in early drought acclimation

    Franzisky, B. L., Mueller, H. M., Du, B., Lux, T., White, P. J., Carpentier, S. C., Winkler, J. B., Schnitzler, J. P., Kudla, J., Kangasjärvi, J., Reichelt, M., Mithöfer, A., Mayer, K. F. X., Rennenberg, H., Ache, P., Hedrich, R., Messerer, M. & Geilfus, C. M., 25 Feb 2025, In: Journal of Experimental Botany. 76, 4, p. 1244-1265 22 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Genomic and transcriptomic insights into legume–rhizobia symbiosis in the nitrogen-fixing tree Robinia pseudoacacia

    Hu, B., Messerer, M., Haberer, G., Lux, T., Marosi, V., Mayer, K. F. X., Oliphant, K. D., Kaufholdt, D., Schulze, J., Kreth, L. S., Jurgeleit, J., Geffers, R., Hänsch, R. & Rennenberg, H., 2025, (Accepted/In press) In: New Phytologist.

    Research output: Contribution to journal › Article › peer-review

  • Genomics: To be (or not to be) a duckweed

    Mayer, K. F. X. & Haberer, G., 21 Apr 2025, In: Current Biology. 35, 8, p. R298-R300

    Research output: Contribution to journal › Comment/debate

  • Integrating Arabidopsis and crop species gene discovery for crop improvement

    Bevan, M. W., Messerer, M., Gundlach, H., Kamal, N., Hall, A., Spannagl, M. & Mayer, K. F. X., 1 May 2025, In: Plant Cell. 37, 5, koaf087.

    Research output: Contribution to journal › Review article › peer-review

    1 Scopus citations

  • The giant genome of lily provides insights into the hybridization of cultivated lilies

    Liang, Y., Gao, Q., Li, F., Du, Y., Wu, J., Pan, W., Wang, S., Zhang, X., Zhang, M., Song, X., Zhong, L., Zhang, F., Li, Y., Wang, Z., Li, D., Duan, Q., Li, S., Jin, C., Zhang, P. & Gu, Y. & 5 others, Chen, Z. H., Mayer, K. F. X., Zhou, X., Wang, J. & Zhang, L., Dec 2025, In: Nature Communications. 16, 1, 45.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations
  • 2024

    Gaining or cutting SLAC: the evolution of plant guard cell signalling pathways

    Sussmilch, F. C., Maierhofer, T., Herrmann, J., Voss, L. J., Lind, C., Messerer, M., Müller, H. M., Bünner, M. S., Ache, P., Mayer, K. F. X., Becker, D., Roelfsema, M. R. G., Geiger, D., Schultz, J. & Hedrich, R., Dec 2024, In: New Phytologist. 244, 6, p. 2295-2310 16 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Integrative multi-omics analyses of date palm (Phoenix dactylifera) roots and leaves reveal how the halophyte land plant copes with sea water

    Mueller, H. M., Franzisky, B. L., Messerer, M., Du, B., Lux, T., White, P. J., Carpentier, S. C., Winkler, J. B., Schnitzler, J. P., El-Serehy, H. A., Al-Rasheid, K. A. S., Al-Harbi, N., Alfarraj, S., Kudla, J., Kangasjärvi, J., Reichelt, M., Mithöfer, A., Mayer, K. F. X., Rennenberg, H. & Ache, P. & 2 others, Hedrich, R. & Geilfus, C. M., Mar 2024, In: Plant Genome. 17, 1, e20372.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • Meiotic recombination dynamics in plants with repeat-based holocentromeres shed light on the primary drivers of crossover patterning

    Castellani, M., Zhang, M., Thangavel, G., Mata-Sucre, Y., Lux, T., Campoy, J. A., Marek, M., Huettel, B., Sun, H., Mayer, K. F. X., Schneeberger, K. & Marques, A., Mar 2024, In: Nature Plants. 10, 3, p. 423-438 16 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    15 Scopus citations

  • Regulation of developmental gatekeeping and cell fate transition by the calpain protease DEK1 in Physcomitrium patens

    Demko, V., Belova, T., Messerer, M., Hvidsten, T. R., Perroud, P. F., Ako, A. E., Johansen, W., Mayer, K. F. X., Olsen, O. A. & Lang, D., Dec 2024, In: Communications Biology. 7, 1, 261.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    3 Scopus citations

  • Structural variation in the pangenome of wild and domesticated barley

    Jayakodi, M., Lu, Q., Pidon, H., Rabanus-Wallace, M. T., Bayer, M., Lux, T., Guo, Y., Jaegle, B., Badea, A., Bekele, W., Brar, G. S., Braune, K., Bunk, B., Chalmers, K. J., Chapman, B., Jørgensen, M. E., Feng, J. W., Feser, M., Fiebig, A. & Gundlach, H. & 60 others, Guo, W., Haberer, G., Hansson, M., Himmelbach, A., Hoffie, I., Hoffie, R. E., Hu, H., Isobe, S., König, P., Kale, S. M., Kamal, N., Keeble-Gagnère, G., Keller, B., Knauft, M., Koppolu, R., Krattinger, S. G., Kumlehn, J., Langridge, P., Li, C., Marone, M. P., Maurer, A., Mayer, K. F. X., Melzer, M., Muehlbauer, G. J., Murozuka, E., Padmarasu, S., Perovic, D., Pillen, K., Pin, P. A., Pozniak, C. J., Ramsay, L., Pedas, P. R., Rutten, T., Sakuma, S., Sato, K., Schüler, D., Schmutzer, T., Scholz, U., Schreiber, M., Shirasawa, K., Simpson, C., Skadhauge, B., Spannagl, M., Steffenson, B. J., Thomsen, H. C., Tibbits, J. F., Nielsen, M. T. S., Trautewig, C., Vequaud, D., Voss, C., Wang, P., Waugh, R., Westcott, S., Rasmussen, M. W., Zhang, R., Zhang, X. Q., Wicker, T., Dockter, C., Mascher, M. & Stein, N., 19 Dec 2024, In: Nature. 636, 8043, p. 654-662 9 p., e2115639118.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    10 Scopus citations

  • The genetics of fruit skin separation in date palm

    Younuskunju, S., Mohamoud, Y. A., Mathew, L. S., Mayer, K. F. X., Suhre, K. & Malek, J. A., Dec 2024, In: BMC Plant Biology. 24, 1, 1050.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1 Scopus citations
  • 2023

    Diplodia sapinea infection reprograms foliar traits of its pine (Pinus sylvestris L.) host to death

    Hu, B., Liu, Z., Haensch, R., Mithöfer, A., Peters, F. S., Vornam, B., Messerer, M., Mayer, K., von Wirén, N. & Rennenberg, H., 1 Apr 2023, In: Tree Physiology. 43, 4, p. 611-629 19 p.

    Research output: Contribution to journal › Article › peer-review

    3 Scopus citations

  • Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet

    Devos, K. M., Qi, P., Bahri, B. A., Gimode, D. M., Jenike, K., Manthi, S. J., Lule, D., Lux, T., Martinez-Bello, L., Pendergast, T. H., Plott, C., Saha, D., Sidhu, G. S., Sreedasyam, A., Wang, X., Wang, H., Wright, H., Zhao, J., Deshpande, S. & de Villiers, S. & 12 others, Dida, M. M., Grimwood, J., Jenkins, J., Lovell, J., Mayer, K. F. X., Mneney, E. E., Ojulong, H. F., Schatz, M. C., Schmutz, J., Song, B., Tesfaye, K. & Odeny, D. A., Dec 2023, In: Nature Communications. 14, 1, 3694.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    30 Scopus citations

  • Genome-wide association of dry (Tamar) date palm fruit color

    Younuskunju, S., Mohamoud, Y. A., Mathew, L. S., Mayer, K. F. X., Suhre, K. & Malek, J. A., Dec 2023, In: Plant Genome. 16, 4, e20373.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    4 Scopus citations
  • 2022

    Differential and complementary selection of heterotic groups

    Haberer, G. & Mayer, K. F. X., Jul 2022, In: Nature Plants. 8, 7, p. 727-728 2 p.

    Research output: Contribution to journal › Comment/debate

  • Genome sequences of three Aegilops species of the section Sitopsis reveal phylogenetic relationships and provide resources for wheat improvement

    Avni, R., Lux, T., Minz-Dub, A., Millet, E., Sela, H., Distelfeld, A., Deek, J., Yu, G., Steuernagel, B., Pozniak, C., Ens, J., Gundlach, H., Mayer, K. F. X., Himmelbach, A., Stein, N., Mascher, M., Spannagl, M., Wulff, B. B. H. & Sharon, A., Apr 2022, In: Plant Journal. 110, 1, p. 179-192 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    54 Scopus citations

  • Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement

    Gaurav, K., Arora, S., Silva, P., Sánchez-Martín, J., Horsnell, R., Gao, L., Brar, G. S., Widrig, V., John Raupp, W., Singh, N., Wu, S., Kale, S. M., Chinoy, C., Nicholson, P., Quiroz-Chávez, J., Simmonds, J., Hayta, S., Smedley, M. A., Harwood, W. & Pearce, S. & 58 others, Gilbert, D., Kangara, N., Gardener, C., Forner-Martínez, M., Liu, J., Yu, G., Boden, S. A., Pascucci, A., Ghosh, S., Hafeez, A. N., O’Hara, T., Waites, J., Cheema, J., Steuernagel, B., Patpour, M., Justesen, A. F., Liu, S., Rudd, J. C., Avni, R., Sharon, A., Steiner, B., Kirana, R. P., Buerstmayr, H., Mehrabi, A. A., Nasyrova, F. Y., Chayut, N., Matny, O., Steffenson, B. J., Sandhu, N., Chhuneja, P., Lagudah, E., Elkot, A. F., Tyrrell, S., Bian, X., Davey, R. P., Simonsen, M., Schauser, L., Tiwari, V. K., Randy Kutcher, H., Hucl, P., Li, A., Liu, D. C., Mao, L., Xu, S., Brown-Guedira, G., Faris, J., Dvorak, J., Luo, M. C., Krasileva, K., Lux, T., Artmeier, S., Mayer, K. F. X., Uauy, C., Mascher, M., Bentley, A. R., Keller, B., Poland, J. & Wulff, B. B. H., Mar 2022, In: Nature Biotechnology. 40, 3, p. 422-431 10 p.

    Research output: Contribution to journal › Article › peer-review

    133 Scopus citations

  • Repeat-based holocentromeres influence genome architecture and karyotype evolution

    Hofstatter, P. G., Thangavel, G., Lux, T., Neumann, P., Vondrak, T., Novak, P., Zhang, M., Costa, L., Castellani, M., Scott, A., Toegelová, H., Fuchs, J., Mata-Sucre, Y., Dias, Y., Vanzela, A. L. L., Huettel, B., Almeida, C. C. S., Šimková, H., Souza, G. & Pedrosa-Harand, A. & 4 others, Macas, J., Mayer, K. F. X., Houben, A. & Marques, A., 18 Aug 2022, In: Cell. 185, 17, p. 3153-3168.e18

    Research output: Contribution to journal › Article › peer-review

    Open Access
    62 Scopus citations

  • Stalk cell polar ion transport provide for bladder-based salinity tolerance in Chenopodium quinoa

    Bazihizina, N., Böhm, J., Messerer, M., Stigloher, C., Müller, H. M., Cuin, T. A., Maierhofer, T., Cabot, J., Mayer, K. F. X., Fella, C., Huang, S., Al-Rasheid, K. A. S., Alquraishi, S., Breadmore, M., Mancuso, S., Shabala, S., Ache, P., Zhang, H., Zhu, J. K. & Hedrich, R. & 1 others, Scherzer, S., Sep 2022, In: New Phytologist. 235, 5, p. 1822-1835 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • The Barley and Wheat Pan-Genomes

    Kamal, N., Lux, T., Jayakodi, M., Haberer, G., Gundlach, H., Mayer, K. F. X., Mascher, M. & Spannagl, M., 2022, Methods in Molecular Biology. Humana Press Inc., p. 147-159 13 p. (Methods in Molecular Biology; vol. 2443).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    6 Scopus citations

  • The mosaic oat genome gives insights into a uniquely healthy cereal crop

    Kamal, N., Tsardakas Renhuldt, N., Bentzer, J., Gundlach, H., Haberer, G., Juhász, A., Lux, T., Bose, U., Tye-Din, J. A., Lang, D., van Gessel, N., Reski, R., Fu, Y. B., Spégel, P., Ceplitis, A., Himmelbach, A., Waters, A. J., Bekele, W. A., Colgrave, M. L. & Hansson, M. & 9 others, Stein, N., Mayer, K. F. X., Jellen, E. N., Maughan, P. J., Tinker, N. A., Mascher, M., Olsson, O., Spannagl, M. & Sirijovski, N., 2 Jun 2022, In: Nature. 606, 7912, p. 113-119 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    140 Scopus citations
  • 2021

    Aegilops tauschii genome assembly Aet v5.0 features greater sequence contiguity and improved annotation

    Wang, L., Zhu, T., Rodriguez, J. C., Deal, K. R., Dubcovsky, J., McGuire, P. E., Lux, T., Spannagl, M., Mayer, K. F. X., Baldrich, P., Meyers, B. C., Huo, N., Gu, Y. Q., Zhou, H., Devos, K. M., Bennetzen, J. L., Unver, T., Budak, H., Gulick, P. J. & Galiba, G. & 6 others, Kalapos, B., Nelson, D. R., Li, P., You, F. M., Luo, M. C. & Dvorak, J., Dec 2021, In: G3: Genes, Genomes, Genetics. 11, 12, jkab325.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    31 Scopus citations

  • Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

    Rabanus-Wallace, M. T., Hackauf, B., Mascher, M., Lux, T., Wicker, T., Gundlach, H., Baez, M., Houben, A., Mayer, K. F. X., Guo, L., Poland, J., Pozniak, C. J., Walkowiak, S., Melonek, J., Praz, C. R., Schreiber, M., Budak, H., Heuberger, M., Steuernagel, B. & Wulff, B. & 43 others, Börner, A., Byrns, B., Čížková, J., Fowler, D. B., Fritz, A., Himmelbach, A., Kaithakottil, G., Keilwagen, J., Keller, B., Konkin, D., Larsen, J., Li, Q., Myśków, B., Padmarasu, S., Rawat, N., Sesiz, U., Biyiklioglu-Kaya, S., Sharpe, A., Šimková, H., Small, I., Swarbreck, D., Toegelová, H., Tsvetkova, N., Voylokov, A. V., Vrána, J., Bauer, E., Bolibok-Bragoszewska, H., Doležel, J., Hall, A., Jia, J., Korzun, V., Laroche, A., Ma, X. F., Ordon, F., Özkan, H., Rakoczy-Trojanowska, M., Scholz, U., Schulman, A. H., Siekmann, D., Stojałowski, S., Tiwari, V. K., Spannagl, M. & Stein, N., Apr 2021, In: Nature Genetics. 53, 4, p. 564-573 10 p.

    Research output: Contribution to journal › Article › peer-review

    158 Scopus citations

  • De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium-Resistant Genes in East Asian Genotypes

    Shimizu, K. K., Copetti, D., Okada, M., Wicker, T., Tameshige, T., Hatakeyama, M., Shimizu-Inatsugi, R., Aquino, C., Nishimura, K., Kobayashi, F., Murata, K., Kuo, T., Delorean, E., Poland, J., Haberer, G., Spannagl, M., Mayer, K. F. X., Gutierrez-Gonzalez, J., Muehlbauer, G. J. & Monat, C. & 13 others, Himmelbach, A., Padmarasu, S., Mascher, M., Walkowiak, S., Nakazaki, T., Ban, T., Kawaura, K., Tsuji, H., Pozniak, C., Stein, N., Sese, J., Nasuda, S. & Handa, H., 1 Jan 2021, In: Plant and Cell Physiology. 62, 1, p. 8-27 20 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    27 Scopus citations

  • Fusarium head blight resistance in European winter wheat: insights from genome-wide transcriptome analysis

    Buerstmayr, M., Wagner, C., Nosenko, T., Omony, J., Steiner, B., Nussbaumer, T., Mayer, K. F. X. & Buerstmayr, H., Dec 2021, In: BMC Genomics. 22, 1, 470.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    24 Scopus citations

  • High molecular weight glutenin gene diversity in Aegilops tauschii demonstrates unique origin of superior wheat quality

    Open Wild Wheat Consortium, Dec 2021, In: Communications Biology. 4, 1, 1242.

    Research output: Contribution to journal › Article › peer-review

    20 Scopus citations

  • Long-read sequence assembly: A technical evaluation in barley

    Mascher, M., Wicker, T., Jenkins, J., Plott, C., Lux, T., Koh, C. S., Ens, J., Gundlach, H., Boston, L. B., Tulpová, Z., Holden, S., Hernández-Pinzón, I., Scholz, U., Mayer, K. F. X., Spannagl, M., Pozniak, C. J., Sharpe, A. G., Simková, H., Moscou, M. J. & Grimwood, J. & 2 others, Schmutz, J. & Stein, N., Jun 2021, In: Plant Cell. 33, 6, p. 1888-1906 19 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    224 Scopus citations

  • Merging genomics and transcriptomics for predicting fusarium head blight resistance in wheat

    Michel, S., Wagner, C., Nosenko, T., Steiner, B., Samad-Zamini, M., Buerstmayr, M., Mayer, K. & Buerstmayr, H., Jan 2021, In: Genes. 12, 1, p. 1-14 14 p., 114.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • Protein expression plasticity contributes to heat and drought tolerance of date palm

    Ghirardo, A., Nosenko, T., Kreuzwieser, J., Winkler, J. B., Kruse, J., Albert, A., Merl-Pham, J., Lux, T., Ache, P., Zimmer, I., Alfarraj, S., Mayer, K. F. X., Hedrich, R., Rennenberg, H. & Schnitzler, J. P., Dec 2021, In: Oecologia. 197, 4, p. 903-919 17 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    22 Scopus citations

  • PYL8 ABA receptors of Phoenix dactylifera play a crucial role in response to abiotic stress and are stabilized by ABA

    Garcia-Maquilon, I., Coego, A., Lozano-Juste, J., Messerer, M., De Ollas, C., Julian, J., Ruiz-Partida, R., Pizzio, G., Belda-Palazón, B., Gomez-Cadenas, A., Mayer, K. F. X., Geiger, D., Alquraishi, S. A., Alrefaei, A. F., Ache, P., Hedrich, R. & Rodriguez, P. L., 2 Feb 2021, In: Journal of Experimental Botany. 72, 2, p. 757-774 18 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    17 Scopus citations
  • 2020

    Current status of the multinational Arabidopsis community

    Parry, G., Provart, N. J., Brady, S. M., Uzilday, B., Adams, K., Araújo, W., Aubourg, S., Baginsky, S., Bakker, E., Bärenfaller, K., Batley, J., Beale, M., Beilstein, M., Belkhadir, Y., Berardini, T., Bergelson, J., Blanco-Herrera, F., Brady, S., Braun, H. P. & Briggs, S. & 118 others, Brownfield, L., Cardarelli, M., Castellanos-Uribe, M., Coruzzi, G., Dassanayake, M., Jaeger, G. D., Dilkes, B., Doherty, C., Ecker, J., Edger, P., Edwards, D., Kasmi, F. E., Eriksson, M., Exposito-Alonso, M., Falter-Braun, P., Fernie, A., Ferro, M., Fiehn, O., Friesner, J., Greenham, K., Guo, Y., Hamann, T., Hancock, A., Hauser, M. T., Heazlewood, J., Ho, C. H., Hõrak, H., Huala, E., Hwang, I., Iuchi, S., Jaiswal, P., Jakobson, L., Jiang, Y., Jiao, Y., Jones, A., Kadota, Y., Khurana, J., Kliebenstein, D., Knee, E., Kobayashi, M., Koch, M., Krouk, G., Larson, T., Last, R., Lepiniec, L., Li, S., Lurin, C., Lysak, M., Maere, S., Malinowski, R., Maumus, F., May, S., Mayer, K., Mendoza-Cozatl, D., Mendoza-Poudereux, I., Meyers, B., Micol, J. L., Millar, H., Mock, H. P., Mukhtar, K., Mukhtar, S., Murcha, M., Nakagami, H., Nakamura, Y., Nicolov, L., Nikolau, B., Nowack, M., Nunes-Nesi, A., Palmgren, M., Parry, G., Patron, N., Peck, S., Pedmale, U., Perrot-Rechenmann, C., Pieruschka, R., Pío-Beltrán, J., Pires, J. C., Provart, N., Rajjou, L., Reiser, L., Reumann, S., Rhee, S., Rigas, S., Rolland, N., Romanowski, A., Santoni, V., Savaldi-Goldstein, S., Schmitz, R., Schulze, W., Seki, M., Shimizu, K. K., Slotkin, K., Small, I., Somers, D., Sozzani, R., Spillane, C., Srinivasan, R., Taylor, N., Tello-Ruiz, M. K., Thelen, J., Tohge, T., Town, C., Toyoda, T., Uzilday, B., Peer, Y. V. D., Wijk, K. V., Gillhaussen, P. V., Walley, J., Ware, D., Weckwerth, W., Whitelegge, J., Wienkoop, S., Wright, C., Wrzaczek, M., Yamazaki, M., Yanovsky, M., Žárský, V. & Zhong, X., 1 Jul 2020, In: Plant Direct. 4, 7, e00248.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    12 Scopus citations

  • Insights into the evolution of symbiosis gene copy number and distribution from a chromosome-scale Lotus japonicus Gifu genome sequence

    Kamal, N., Mun, T., Reid, D., Lin, J. S., Akyol, T. Y., Sandal, N., Asp, T., Hirakawa, H., Stougaard, J., Mayer, K. F. X., Sato, S. & Andersen, S. U., 1 Jun 2020, In: DNA Research. 27, 3, dsaa015.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    40 Scopus citations

  • Multiple wheat genomes reveal global variation in modern breeding

    Walkowiak, S., Gao, L., Monat, C., Haberer, G., Kassa, M. T., Brinton, J., Ramirez-Gonzalez, R. H., Kolodziej, M. C., Delorean, E., Thambugala, D., Klymiuk, V., Byrns, B., Gundlach, H., Bandi, V., Siri, J. N., Nilsen, K., Aquino, C., Himmelbach, A., Copetti, D. & Ban, T. & 78 others, Venturini, L., Bevan, M., Clavijo, B., Koo, D. H., Ens, J., Wiebe, K., N’Diaye, A., Fritz, A. K., Gutwin, C., Fiebig, A., Fosker, C., Fu, B. X., Accinelli, G. G., Gardner, K. A., Fradgley, N., Gutierrez-Gonzalez, J., Halstead-Nussloch, G., Hatakeyama, M., Koh, C. S., Deek, J., Costamagna, A. C., Fobert, P., Heavens, D., Kanamori, H., Kawaura, K., Kobayashi, F., Krasileva, K., Kuo, T., McKenzie, N., Murata, K., Nabeka, Y., Paape, T., Padmarasu, S., Percival-Alwyn, L., Kagale, S., Scholz, U., Sese, J., Juliana, P., Singh, R., Shimizu-Inatsugi, R., Swarbreck, D., Cockram, J., Budak, H., Tameshige, T., Tanaka, T., Tsuji, H., Wright, J., Wu, J., Steuernagel, B., Small, I., Cloutier, S., Keeble-Gagnère, G., Muehlbauer, G., Tibbets, J., Nasuda, S., Melonek, J., Hucl, P. J., Sharpe, A. G., Clark, M., Legg, E., Bharti, A., Langridge, P., Hall, A., Uauy, C., Mascher, M., Krattinger, S. G., Handa, H., Shimizu, K. K., Distelfeld, A., Chalmers, K., Keller, B., Mayer, K. F. X., Poland, J., Stein, N., McCartney, C. A., Spannagl, M., Wicker, T. & Pozniak, C. J., 10 Dec 2020, In: Nature. 588, 7837, p. 277-283 7 p.

    Research output: Contribution to journal › Article › peer-review

    590 Scopus citations

  • The barley pan-genome reveals the hidden legacy of mutation breeding

    Jayakodi, M., Padmarasu, S., Haberer, G., Bonthala, V. S., Gundlach, H., Monat, C., Lux, T., Kamal, N., Lang, D., Himmelbach, A., Ens, J., Zhang, X. Q., Angessa, T. T., Zhou, G., Tan, C., Hill, C., Wang, P., Schreiber, M., Boston, L. B. & Plott, C. & 24 others, Jenkins, J., Guo, Y., Fiebig, A., Budak, H., Xu, D., Zhang, J., Wang, C., Grimwood, J., Schmutz, J., Guo, G., Zhang, G., Mochida, K., Hirayama, T., Sato, K., Chalmers, K. J., Langridge, P., Waugh, R., Pozniak, C. J., Scholz, U., Mayer, K. F. X., Spannagl, M., Li, C., Mascher, M. & Stein, N., 10 Dec 2020, In: Nature. 588, 7837, p. 284-289 6 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    352 Scopus citations
  • 2019

    Computational aspects underlying genome to phenome analysis in plants

    Bolger, A. M., Poorter, H., Dumschott, K., Bolger, M. E., Arend, D., Osorio, S., Gundlach, H., Mayer, K. F. X., Lange, M., Scholz, U. & Usadel, B., Jan 2019, In: Plant Journal. 97, 1, p. 182-198 17 p.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    51 Scopus citations

  • Durum wheat genome highlights past domestication signatures and future improvement targets

    Maccaferri, M., Harris, N. S., Twardziok, S. O., Pasam, R. K., Gundlach, H., Spannagl, M., Ormanbekova, D., Lux, T., Prade, V. M., Milner, S. G., Himmelbach, A., Mascher, M., Bagnaresi, P., Faccioli, P., Cozzi, P., Lauria, M., Lazzari, B., Stella, A., Manconi, A. & Gnocchi, M. & 48 others, Moscatelli, M., Avni, R., Deek, J., Biyiklioglu, S., Frascaroli, E., Corneti, S., Salvi, S., Sonnante, G., Desiderio, F., Marè, C., Crosatti, C., Mica, E., Özkan, H., Kilian, B., De Vita, P., Marone, D., Joukhadar, R., Mazzucotelli, E., Nigro, D., Gadaleta, A., Chao, S., Faris, J. D., Melo, A. T. O., Pumphrey, M., Pecchioni, N., Milanesi, L., Wiebe, K., Ens, J., MacLachlan, R. P., Clarke, J. M., Sharpe, A. G., Koh, C. S., Liang, K. Y. H., Taylor, G. J., Knox, R., Budak, H., Mastrangelo, A. M., Xu, S. S., Stein, N., Hale, I., Distelfeld, A., Hayden, M. J., Tuberosa, R., Walkowiak, S., Mayer, K. F. X., Ceriotti, A., Pozniak, C. J. & Cattivelli, L., 1 May 2019, In: Nature Genetics. 51, 5, p. 885-895 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    530 Scopus citations

  • Groundwater flow and volcanic unrest

    Jasim, A., Hemmings, B., Mayer, K. & Scheu, B., 2019, Advances in Volcanology. Springer Science and Business Media Deutschland GmbH, p. 83-99 17 p. (Advances in Volcanology).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    22 Scopus citations

  • Hydrothermal eruptions at unstable crater lakes: Insights from the Boiling Lake, Dominica, Lesser Antilles

    Rott, S., Scheu, B., Montanaro, C., Mayer, K., Joseph, E. P. & Dingwell, D. B., 1 Sep 2019, In: Journal of Volcanology and Geothermal Research. 381, p. 101-118 18 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6 Scopus citations

  • The systems architecture of molecular memory in poplar after abiotic stress

    Georgii, E., Kugler, K., Pfeifer, M., Vanzo, E., Block, K., Domagalska, M. A., Jud, W., Elgawad, H. A., Asard, H., Reinhardt, R., Hansel, A., Spannagl, M., Schäffner, A. R., Palme, K., Mayer, K. F. X. & Schnitzler, J. P., Feb 2019, In: Plant Cell. 31, 2, p. 346-367 22 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    31 Scopus citations

  • Tracing the ancestry of modern bread wheats

    Wheat and Barley Legacy for Breeding Improvement (WHEALBI) consortium, 1 May 2019, In: Nature Genetics. 51, 5, p. 905-911 7 p.

    Research output: Contribution to journal › Article › peer-review

    191 Scopus citations

  • TRITEX: Chromosome-scale sequence assembly of Triticeae genomes with open-source tools

    Monat, C., Padmarasu, S., Lux, T., Wicker, T., Gundlach, H., Himmelbach, A., Ens, J., Li, C., Muehlbauer, G. J., Schulman, A. H., Waugh, R., Braumann, I., Pozniak, C., Scholz, U., Mayer, K. F. X., Spannagl, M., Stein, N. & Mascher, M., 18 Dec 2019, In: Genome Biology. 20, 1, 284.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    164 Scopus citations
  • 2018

    Analysis of Stress Resistance Using Next Generation Techniques

    Id, M. M., Id, D. L. & Mayer, K. F. X., 27 Jul 2018, In: Agronomy. 8, 8, 141.

    Research output: Contribution to journal › Review article › peer-review

    Open Access
    10 Scopus citations

  • Chromosome-scale comparative sequence analysis unravels molecular mechanisms of genome dynamics between two wheat cultivars

    International Wheat Genome Sequencing Consortium, 17 Aug 2018, In: Genome Biology. 19, 1, 104.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    35 Scopus citations

  • Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris

    Vogel, A., Schwacke, R., Denton, A. K., Usadel, B., Hollmann, J., Fischer, K., Bolger, A., Schmidt, M. H. W., Bolger, M. E., Gundlach, H., Mayer, K. F. X., Weiss-Schneeweiss, H., Temsch, E. M. & Krause, K., 1 Dec 2018, In: Nature Communications. 9, 1, 2515.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    133 Scopus citations

  • Genome mapping of seed-borne allergens and immunoresponsive proteins in wheat

    International Wheat Genome Sequencing Consortium9, 17 Aug 2018, In: Science Advances. 4, 8, eaar8602.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    121 Scopus citations

  • Hidden variation in polyploid wheat drives local adaptation

    Gardiner, L. J., Joynson, R., Omony, J., Rusholme-Pilcher, R., Olohan, L., Lang, D., Bai, C., Hawkesford, M., Salt, D., Spannagl, M., Mayer, K. F. X., Kenny, J., Bevan, M., Hall, N. & Hall, A., Sep 2018, In: Genome Research. 28, 9, p. 1319-1332 14 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    45 Scopus citations

  • Impact of transposable elements on genome structure and evolution in bread wheat

    International Wheat Genome Sequencing Consortium, 17 Aug 2018, In: Genome Biology. 19, 1, 103.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    200 Scopus citations

  • Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis

    Griesmann, M., Chang, Y., Liu, X., Song, Y., Haberer, G., Crook, M. B., Billault-Penneteau, B., Lauressergues, D., Keller, J., Imanishi, L., Roswanjaya, Y. P., Kohlen, W., Pujic, P., Battenberg, K., Alloisio, N., Liang, Y., Hilhorst, H., Salgado, M. G., Hocher, V. & Gherbi, H. & 22 others, Svistoonoff, S., Doyle, J. J., He, S., Xu, Y., Xu, S., Qu, J., Gao, Q., Fang, X., Fu, Y., Normand, P., Berry, A. M., Wall, L. G., Ané, J. M., Pawlowski, K., Xu, X., Yang, H., Spannagl, M., Mayer, K. F. X., Wong, G. K. S., Parniske, M., Delaux, P. M. & Cheng, S., 13 Jul 2018, In: Science. 361, 6398, eaat1743.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    299 Scopus citations

  • Shifting the limits in wheat research and breeding using a fully annotated reference genome

    International Wheat Genome Sequencing Consortium (IWGSC), 17 Aug 2018, In: Science. 361, 6403, eaar7191.

    Research output: Contribution to journal › Article › peer-review

    2369 Scopus citations