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  • 2018

    Information Theoretic Concepts to Unravel Cell–Cell Communication

    Müller, N., Sass, S., Offermann, B., Singh, A., Knauer, S., Schüttler, A., Minardi, J. N., Theis, F., Busch, H. & Boerries, M., 2018, Lecture Notes in Bioengineering. Springer, p. 115-136 22 p. (Lecture Notes in Bioengineering).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • MicroRNA as an Integral Part of Cell Communication: Regularized Target Prediction and Network Prediction

    Backofen, R., Costa, F., Theis, F., Marr, C., Preusse, M., Becker, C., Saunders, S., Palme, K. & Dovzhenko, O., 2018, Lecture Notes in Bioengineering. Springer, p. 85-100 16 p. (Lecture Notes in Bioengineering).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • 2016

    Bayesian Model Selection Methods and Their Application to Biological ODE Systems

    Hug, S., Schmidl, D., Li, W. B., Greiter, M. B. & Theis, F. J., 2016, Studies in Mechanobiology, Tissue Engineering and Biomaterials. Springer, p. 243-268 26 p. (Studies in Mechanobiology, Tissue Engineering and Biomaterials; vol. 17).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    9 Scopus citations
  • 2014

    Systems biology meets metabolism

    Krumsiek, J., Stückler, F., Kastenmüller, G. & Theis, F. J., 1 Jul 2014, Genetics Meets Metabolomics: From Experiment to Systems Biology. Springer New York, p. 281-313 33 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • 2013

    Systematic complexity reduction of signaling models and application to a CD95 signaling model for apoptosis

    Rickert, D., Fricker, N., Lavrik, I. N. & Theis, F. J., 1 Aug 2013, Systems Biology of Apoptosis. Springer New York, p. 57-84 28 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • 2012

    An ensemble approach for inferring semi-quantitative regulatory dynamics for the differentiation of mouse embryonic stem cells using prior knowledge

    Lutter, D., Bruns, P. & Theis, F. J., 2012, Advances in Systems Biology. p. 247-260 14 p. (Advances in Experimental Medicine and Biology; vol. 736).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    4 Scopus citations
  • Modularity maximization and tree clustering: Novel ways to determine effective geographic borders

    Grady, D., Brune, R., Thiemann, C., Theis, F. & Brockmann, D., 2012, Springer Optimization and Its Applications. Springer International Publishing, p. 169-208 40 p. (Springer Optimization and Its Applications; vol. 57).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    Open Access
    9 Scopus citations
  • PhenomiR: MicroRNAs in human diseases and biological processes

    Ruepp, A., Kowarsch, A. & Theis, F., 2012, Next-Generation MicroRNA Expression Profiling Technology: Methods and Protocols. Fan, J.-B. (ed.). p. 249-260 12 p. (Methods in Molecular Biology; vol. 822).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    57 Scopus citations
  • 2009

    Optimization techniques for data representations with biomedical applications

    Georgiev, P. G. & Theis, F. J., 2009, Springer Optimization and Its Applications. Springer International Publishing, p. 253-290 38 p. (Springer Optimization and Its Applications; vol. 26).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • 2007

    Sparse component analysis: A new tool for data mining

    Georgiev, P., Theis, F., Cichocki, A. & Bakardjian, H., 2007, Springer Optimization and Its Applications. Springer International Publishing, p. 91-116 26 p. (Springer Optimization and Its Applications; vol. 7).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    34 Scopus citations
  • 2004

    3D spatial analysis of fMRI data on a word perception task

    Keck, I. R., Theis, F. J., Gruber, P., Lang, E. W., Specht, K. & Puntonet, C. G., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 977-984 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    7 Scopus citations
  • Blind source separation of linear mixtures with singular matrices

    Georgiev, P. & Theis, F. J., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 121-128 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    6 Scopus citations
  • Denoising using local ICA and a generalized eigendecomposition with time-delayed signals

    Gruber, P., Stadlthanner, K., Tomé, A. M., Teixeira, A. R., Theis, F. J., Puntonet, C. G. & Lang, E. W., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 993-1000 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    9 Scopus citations
  • Postnonlinear overcomplete blind source separation using sparse sources

    Theis, F. J. & Amari, S. I., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 718-725 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    9 Scopus citations
  • Second-order blind source separation based on multi-dimensional autocovariances

    Theis, F. J., Meyer-Bäse, A. & Lang, E. W., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 726-733 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    20 Scopus citations
  • Tree-dependent and topographic independent component analysis for fMRI analysis

    Meyer-Bäse, A., Theis, F. J., Lange, O. & Puntonet, C. G., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Puntonet, C. G. & Prieto, A. (eds.). Springer Verlag, p. 782-789 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3195).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    9 Scopus citations
  • 2003

    A generalized eigendecomposition approach using matrix pencils to remove artefacts from 2D NMR spectra

    Stadlthanner, K., Tomé, A. M., Theis, F. J. & Lang, E. W., 2003, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Mira, J. & Alvarez, J. R. (eds.). Springer Verlag, p. 575-582 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 2687).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • An adaptive approach to blind source separation using a self-organzing map and a neural gas

    Theis, F. J., Álvarez, M. R., Puntonet, C. G. & Lang, E. W., 2003, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Mira, J. & Alvarez, J. R. (eds.). Springer Verlag, p. 695-702 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 2687).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • An improved geometric overcomplete blind source separation algorithm

    Theis, F. J., Puntonet, C. G. & Lang, E. W., 2003, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Mira, J. & Alvarez, J. R. (eds.). Springer Verlag, p. 265-272 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 2687).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Generalizing geometric ICA to nonlinear settings

    Theis, F. J., Puntonet, C. G. & Lang, E. W., 2003, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Mira, J. & Alvarez, J. R. (eds.). Springer Verlag, p. 687-694 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 2687).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations