Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana

M. Salanoubat; K. Lemcke; M. Rieger; W. Ansorge; M. Unseld; B. Fartmann; G. Valle; H. Blöcker; M. Perez-Alonso; B. Obermaier; M. Delseny; M. Boutry; L. A. Grivell; R. Mache; P. Puigdomènech; V. De Simone; N. Choisne; F. Artiguenave; C. Robert; P. Brottier; P. Wincker; L. Cattolico; J. Weissenbach; W. Saurin; F. Quétier; M. Schäfer; S. Müller-Auer; C. Gabel; M. Fuchs; V. Benes; E. Wurmbach; H. Drzonek; H. Erfle; N. Jordan; S. Bangert; R. Wiedelmann; H. Kranz; H. Voss; R. Holland; P. Brandt; G. Nyakatura; A. Vezzi; M. D'Angelo; A. Pallavicini; S. Toppo; B. Simionati; A. Conrad; K. Hornischer; G. Kauer; T. H. Löhnert; G. Nordsiek; J. Reichelt; M. Scharfe; O. Schön; M. Bargues; J. Terol; J. Climent; P. Navarro; C. Collado; A. Perez-Perez; B. Ottenwälder; D. Duchemin; R. Cooke; M. Laudie; C. Berger-Llauro; B. Purnelle; D. Masuy; M. de Haan; A. C. Maarse; J. P. Alcaraz; A. Cottet; E. Casacuberta; A. Monfort; A. Argiriou; M. Flores; R. Liguori; D. Vitale; G. Mannhaupt; D. Haase; H. Schoof; S. Rudd; P. Zaccaria; H. W. Mewes; K. F.X. Mayer; Samir Kaul; Christopher D. Town; Hean L. Koo; Luke J. Tallon; Jennifer Jenkins; Timothy Rooney; Michael Rizzo; Avram Walts; Teresa Utterback; Claire Y. Fujii; Terrance P. Shea; Todd H. Creasy; Brian Haas; Rama Maiti; Dongying Wu; Jeremy Peterson; Susan Van Aken; Grace Pai; Jennifer Militscher; Patrick Sellers; John E. Gill; Tamara V. Feldblyum; Daphne Preuss; Xiaoying Lin; William C. Nierman; Steven L. Salzberg; Owen White; J. Craig Venter; Claire M. Fraser; T. Kaneko; Y. Nakamura; S. Sato; T. Kato; E. Asamizu; S. Sasamoto; T. Kimura; K. Idesawa; K. Kawashima; Y. Kishida; C. Kiyokawa; M. Kohara; M. Matsumoto; A. Matsuno; A. Muraki; S. Nakayama; N. Nakazaki; S. Shinpo; C. Takeuchi; T. Wada; A. Watanabe; M. Yamada; M. Yasuda; S. Tabata

doi:10.1038/35048706

Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana

M. Salanoubat, K. Lemcke, M. Rieger, W. Ansorge, M. Unseld, B. Fartmann, G. Valle, H. Blöcker, M. Perez-Alonso, B. Obermaier, M. Delseny, M. Boutry, L. A. Grivell, R. Mache, P. Puigdomènech, V. De Simone, N. Choisne, F. Artiguenave, C. Robert, P. BrottierP. Wincker, L. Cattolico, J. Weissenbach, W. Saurin, F. Quétier, M. Schäfer, S. Müller-Auer, C. Gabel, M. Fuchs, V. Benes, E. Wurmbach, H. Drzonek, H. Erfle, N. Jordan, S. Bangert, R. Wiedelmann, H. Kranz, H. Voss, R. Holland, P. Brandt, G. Nyakatura, A. Vezzi, M. D'Angelo, A. Pallavicini, S. Toppo, B. Simionati, A. Conrad, K. Hornischer, G. Kauer, T. H. Löhnert, G. Nordsiek, J. Reichelt, M. Scharfe, O. Schön, M. Bargues, J. Terol, J. Climent, P. Navarro, C. Collado, A. Perez-Perez, B. Ottenwälder, D. Duchemin, R. Cooke, M. Laudie, C. Berger-Llauro, B. Purnelle, D. Masuy, M. de Haan, A. C. Maarse, J. P. Alcaraz, A. Cottet, E. Casacuberta, A. Monfort, A. Argiriou, M. Flores, R. Liguori, D. Vitale, G. Mannhaupt, D. Haase, H. Schoof, S. Rudd, P. Zaccaria, H. W. Mewes, K. F.X. Mayer, Samir Kaul, Christopher D. Town, Hean L. Koo, Luke J. Tallon, Jennifer Jenkins, Timothy Rooney, Michael Rizzo, Avram Walts, Teresa Utterback, Claire Y. Fujii, Terrance P. Shea, Todd H. Creasy, Brian Haas, Rama Maiti, Dongying Wu, Jeremy Peterson, Susan Van Aken, Grace Pai, Jennifer Militscher, Patrick Sellers, John E. Gill, Tamara V. Feldblyum, Daphne Preuss, Xiaoying Lin, William C. Nierman, Steven L. Salzberg, Owen White, J. Craig Venter, Claire M. Fraser, T. Kaneko, Y. Nakamura, S. Sato, T. Kato, E. Asamizu, S. Sasamoto, T. Kimura, K. Idesawa, K. Kawashima, Y. Kishida, C. Kiyokawa, M. Kohara, M. Matsumoto, A. Matsuno, A. Muraki, S. Nakayama, N. Nakazaki, S. Shinpo, C. Takeuchi, T. Wada, A. Watanabe, M. Yamada, M. Yasuda, S. Tabata

Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung

154 Zitate (Scopus)

Abstract

Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the roughly 25,500 predicted protein-coding genes in the genome. About 20% of the predicted proteins have significant homology to proteins in eukaryotic genomes for which the complete sequence is available, pointing to important conserved cellular functions among eukaryotes.

Originalsprache	Englisch
Seiten (von - bis)	820-822
Seitenumfang	3
Fachzeitschrift	Nature
Jahrgang	408
Ausgabenummer	6814
DOIs	https://doi.org/10.1038/35048706
Publikationsstatus	Veröffentlicht - 14 Dez. 2000
Extern publiziert	Ja

Zugriff auf Dokument

10.1038/35048706

Andere Dateien und Links

Verknüpfung zur Publikation in Scopus

Dieses zitieren

Salanoubat, M., Lemcke, K., Rieger, M., Ansorge, W., Unseld, M., Fartmann, B., Valle, G., Blöcker, H., Perez-Alonso, M., Obermaier, B., Delseny, M., Boutry, M., Grivell, L. A., Mache, R., Puigdomènech, P., De Simone, V., Choisne, N., Artiguenave, F., Robert, C., ... Tabata, S. (2000). Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature, 408(6814), 820-822. https://doi.org/10.1038/35048706

@article{a4c1662e4c8042dd97f21e3d36cb96e6,

title = "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana",

abstract = "Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the roughly 25,500 predicted protein-coding genes in the genome. About 20% of the predicted proteins have significant homology to proteins in eukaryotic genomes for which the complete sequence is available, pointing to important conserved cellular functions among eukaryotes.",

author = "M. Salanoubat and K. Lemcke and M. Rieger and W. Ansorge and M. Unseld and B. Fartmann and G. Valle and H. Bl{\"o}cker and M. Perez-Alonso and B. Obermaier and M. Delseny and M. Boutry and Grivell, {L. A.} and R. Mache and P. Puigdom{\`e}nech and {De Simone}, V. and N. Choisne and F. Artiguenave and C. Robert and P. Brottier and P. Wincker and L. Cattolico and J. Weissenbach and W. Saurin and F. Qu{\'e}tier and M. Sch{\"a}fer and S. M{\"u}ller-Auer and C. Gabel and M. Fuchs and V. Benes and E. Wurmbach and H. Drzonek and H. Erfle and N. Jordan and S. Bangert and R. Wiedelmann and H. Kranz and H. Voss and R. Holland and P. Brandt and G. Nyakatura and A. Vezzi and M. D'Angelo and A. Pallavicini and S. Toppo and B. Simionati and A. Conrad and K. Hornischer and G. Kauer and L{\"o}hnert, {T. H.} and G. Nordsiek and J. Reichelt and M. Scharfe and O. Sch{\"o}n and M. Bargues and J. Terol and J. Climent and P. Navarro and C. Collado and A. Perez-Perez and B. Ottenw{\"a}lder and D. Duchemin and R. Cooke and M. Laudie and C. Berger-Llauro and B. Purnelle and D. Masuy and {de Haan}, M. and Maarse, {A. C.} and Alcaraz, {J. P.} and A. Cottet and E. Casacuberta and A. Monfort and A. Argiriou and M. Flores and R. Liguori and D. Vitale and G. Mannhaupt and D. Haase and H. Schoof and S. Rudd and P. Zaccaria and Mewes, {H. W.} and Mayer, {K. F.X.} and Samir Kaul and Town, {Christopher D.} and Koo, {Hean L.} and Tallon, {Luke J.} and Jennifer Jenkins and Timothy Rooney and Michael Rizzo and Avram Walts and Teresa Utterback and Fujii, {Claire Y.} and Shea, {Terrance P.} and Creasy, {Todd H.} and Brian Haas and Rama Maiti and Dongying Wu and Jeremy Peterson and {Van Aken}, Susan and Grace Pai and Jennifer Militscher and Patrick Sellers and Gill, {John E.} and Feldblyum, {Tamara V.} and Daphne Preuss and Xiaoying Lin and Nierman, {William C.} and Salzberg, {Steven L.} and Owen White and Venter, {J. Craig} and Fraser, {Claire M.} and T. Kaneko and Y. Nakamura and S. Sato and T. Kato and E. Asamizu and S. Sasamoto and T. Kimura and K. Idesawa and K. Kawashima and Y. Kishida and C. Kiyokawa and M. Kohara and M. Matsumoto and A. Matsuno and A. Muraki and S. Nakayama and N. Nakazaki and S. Shinpo and C. Takeuchi and T. Wada and A. Watanabe and M. Yamada and M. Yasuda and S. Tabata",

year = "2000",

month = dec,

day = "14",

doi = "10.1038/35048706",

language = "English",

volume = "408",

pages = "820--822",

journal = "Nature",

issn = "0028-0836",

publisher = "Nature Publishing Group",

number = "6814",

}

Salanoubat, M, Lemcke, K, Rieger, M, Ansorge, W, Unseld, M, Fartmann, B, Valle, G, Blöcker, H, Perez-Alonso, M, Obermaier, B, Delseny, M, Boutry, M, Grivell, LA, Mache, R, Puigdomènech, P, De Simone, V, Choisne, N, Artiguenave, F, Robert, C, Brottier, P, Wincker, P, Cattolico, L, Weissenbach, J, Saurin, W, Quétier, F, Schäfer, M, Müller-Auer, S, Gabel, C, Fuchs, M, Benes, V, Wurmbach, E, Drzonek, H, Erfle, H, Jordan, N, Bangert, S, Wiedelmann, R, Kranz, H, Voss, H, Holland, R, Brandt, P, Nyakatura, G, Vezzi, A, D'Angelo, M, Pallavicini, A, Toppo, S, Simionati, B, Conrad, A, Hornischer, K, Kauer, G, Löhnert, TH, Nordsiek, G, Reichelt, J, Scharfe, M, Schön, O, Bargues, M, Terol, J, Climent, J, Navarro, P, Collado, C, Perez-Perez, A, Ottenwälder, B, Duchemin, D, Cooke, R, Laudie, M, Berger-Llauro, C, Purnelle, B, Masuy, D, de Haan, M, Maarse, AC, Alcaraz, JP, Cottet, A, Casacuberta, E, Monfort, A, Argiriou, A, Flores, M, Liguori, R, Vitale, D, Mannhaupt, G, Haase, D, Schoof, H, Rudd, S, Zaccaria, P, Mewes, HW , Mayer, KFX, Kaul, S, Town, CD, Koo, HL, Tallon, LJ, Jenkins, J, Rooney, T, Rizzo, M, Walts, A, Utterback, T, Fujii, CY, Shea, TP, Creasy, TH, Haas, B, Maiti, R, Wu, D, Peterson, J, Van Aken, S, Pai, G, Militscher, J, Sellers, P, Gill, JE, Feldblyum, TV, Preuss, D, Lin, X, Nierman, WC, Salzberg, SL, White, O, Venter, JC, Fraser, CM, Kaneko, T, Nakamura, Y, Sato, S, Kato, T, Asamizu, E, Sasamoto, S, Kimura, T, Idesawa, K, Kawashima, K, Kishida, Y, Kiyokawa, C, Kohara, M, Matsumoto, M, Matsuno, A, Muraki, A, Nakayama, S, Nakazaki, N, Shinpo, S, Takeuchi, C, Wada, T, Watanabe, A, Yamada, M, Yasuda, M & Tabata, S 2000, 'Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana', Nature, Jg. 408, Nr. 6814, S. 820-822. https://doi.org/10.1038/35048706

TY - JOUR

T1 - Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana

AU - Salanoubat, M.

AU - Lemcke, K.

AU - Rieger, M.

AU - Ansorge, W.

AU - Unseld, M.

AU - Fartmann, B.

AU - Valle, G.

AU - Blöcker, H.

AU - Perez-Alonso, M.

AU - Obermaier, B.

AU - Delseny, M.

AU - Boutry, M.

AU - Grivell, L. A.

AU - Mache, R.

AU - Puigdomènech, P.

AU - De Simone, V.

AU - Choisne, N.

AU - Artiguenave, F.

AU - Robert, C.

AU - Brottier, P.

AU - Wincker, P.

AU - Cattolico, L.

AU - Weissenbach, J.

AU - Saurin, W.

AU - Quétier, F.

AU - Schäfer, M.

AU - Müller-Auer, S.

AU - Gabel, C.

AU - Fuchs, M.

AU - Benes, V.

AU - Wurmbach, E.

AU - Drzonek, H.

AU - Erfle, H.

AU - Jordan, N.

AU - Bangert, S.

AU - Wiedelmann, R.

AU - Kranz, H.

AU - Voss, H.

AU - Holland, R.

AU - Brandt, P.

AU - Nyakatura, G.

AU - Vezzi, A.

AU - D'Angelo, M.

AU - Pallavicini, A.

AU - Toppo, S.

AU - Simionati, B.

AU - Conrad, A.

AU - Hornischer, K.

AU - Kauer, G.

AU - Löhnert, T. H.

AU - Nordsiek, G.

AU - Reichelt, J.

AU - Scharfe, M.

AU - Schön, O.

AU - Bargues, M.

AU - Terol, J.

AU - Climent, J.

AU - Navarro, P.

AU - Collado, C.

AU - Perez-Perez, A.

AU - Ottenwälder, B.

AU - Duchemin, D.

AU - Cooke, R.

AU - Laudie, M.

AU - Berger-Llauro, C.

AU - Purnelle, B.

AU - Masuy, D.

AU - de Haan, M.

AU - Maarse, A. C.

AU - Alcaraz, J. P.

AU - Cottet, A.

AU - Casacuberta, E.

AU - Monfort, A.

AU - Argiriou, A.

AU - Flores, M.

AU - Liguori, R.

AU - Vitale, D.

AU - Mannhaupt, G.

AU - Haase, D.

AU - Schoof, H.

AU - Rudd, S.

AU - Zaccaria, P.

AU - Mewes, H. W.

AU - Mayer, K. F.X.

AU - Kaul, Samir

AU - Town, Christopher D.

AU - Koo, Hean L.

AU - Tallon, Luke J.

AU - Jenkins, Jennifer

AU - Rooney, Timothy

AU - Rizzo, Michael

AU - Walts, Avram

AU - Utterback, Teresa

AU - Fujii, Claire Y.

AU - Shea, Terrance P.

AU - Creasy, Todd H.

AU - Haas, Brian

AU - Maiti, Rama

AU - Wu, Dongying

AU - Peterson, Jeremy

AU - Van Aken, Susan

AU - Pai, Grace

AU - Militscher, Jennifer

AU - Sellers, Patrick

AU - Gill, John E.

AU - Feldblyum, Tamara V.

AU - Preuss, Daphne

AU - Lin, Xiaoying

AU - Nierman, William C.

AU - Salzberg, Steven L.

AU - White, Owen

AU - Venter, J. Craig

AU - Fraser, Claire M.

AU - Kaneko, T.

AU - Nakamura, Y.

AU - Sato, S.

AU - Kato, T.

AU - Asamizu, E.

AU - Sasamoto, S.

AU - Kimura, T.

AU - Idesawa, K.

AU - Kawashima, K.

AU - Kishida, Y.

AU - Kiyokawa, C.

AU - Kohara, M.

AU - Matsumoto, M.

AU - Matsuno, A.

AU - Muraki, A.

AU - Nakayama, S.

AU - Nakazaki, N.

AU - Shinpo, S.

AU - Takeuchi, C.

AU - Wada, T.

AU - Watanabe, A.

AU - Yamada, M.

AU - Yasuda, M.

AU - Tabata, S.

PY - 2000/12/14

Y1 - 2000/12/14

N2 - Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the roughly 25,500 predicted protein-coding genes in the genome. About 20% of the predicted proteins have significant homology to proteins in eukaryotic genomes for which the complete sequence is available, pointing to important conserved cellular functions among eukaryotes.

AB - Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes 5,220 of the roughly 25,500 predicted protein-coding genes in the genome. About 20% of the predicted proteins have significant homology to proteins in eukaryotic genomes for which the complete sequence is available, pointing to important conserved cellular functions among eukaryotes.

UR - http://www.scopus.com/inward/record.url?scp=0034649582&partnerID=8YFLogxK

U2 - 10.1038/35048706

DO - 10.1038/35048706

M3 - Article

AN - SCOPUS:0034649582

SN - 0028-0836

VL - 408

SP - 820

EP - 822

JO - Nature

JF - Nature

IS - 6814

ER -

Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana

Abstract

Zugriff auf Dokument

Andere Dateien und Links

Fingerprint

Dieses zitieren