TY - JOUR
T1 - Pseudogenerators of spatial transfer operators
AU - Bittracher, Andreas
AU - Koltai, Péter
AU - Junge, Oliver
N1 - Publisher Copyright:
Copyright © by SIAM.
PY - 2015
Y1 - 2015
N2 - Metastable behavior in dynamical systems may be a significant challenge for a simulation-based analysis. In recent years, transfer operator-based approaches to problems exhibiting metastability have matured. In order to make these approaches computationally feasible for larger systems, various reduction techniques have been proposed: For example, Schutte introduced a spatial transfer operator which acts on densities on configuration space, while Weber proposed to avoid trajectory simulation (like Froyland, Junge, and Koltai) by considering a discrete generator. In this paper, we show that even though the family of spatial transfer operators is not a semigroup, it possesses a well-defined generating structure. What is more, the pseudogenerators up to order 4 in the Taylor expansion of this family have particularly simple explicit expressions involving no momentum averaging. This makes collocation methods particularly easy to implement and computationally efficient, which in turn may open the door for further efficiency improvements in, e.g., the computational treatment of conformation dynamics. We experimentally verify the predicted properties of these pseudogenerators by means of two academic examples.
AB - Metastable behavior in dynamical systems may be a significant challenge for a simulation-based analysis. In recent years, transfer operator-based approaches to problems exhibiting metastability have matured. In order to make these approaches computationally feasible for larger systems, various reduction techniques have been proposed: For example, Schutte introduced a spatial transfer operator which acts on densities on configuration space, while Weber proposed to avoid trajectory simulation (like Froyland, Junge, and Koltai) by considering a discrete generator. In this paper, we show that even though the family of spatial transfer operators is not a semigroup, it possesses a well-defined generating structure. What is more, the pseudogenerators up to order 4 in the Taylor expansion of this family have particularly simple explicit expressions involving no momentum averaging. This makes collocation methods particularly easy to implement and computationally efficient, which in turn may open the door for further efficiency improvements in, e.g., the computational treatment of conformation dynamics. We experimentally verify the predicted properties of these pseudogenerators by means of two academic examples.
KW - Infinitesimal generator
KW - Metastability
KW - Molecular dynamics
KW - Spectral collocation
KW - Transfer operator
UR - http://www.scopus.com/inward/record.url?scp=84943243877&partnerID=8YFLogxK
U2 - 10.1137/14099872X
DO - 10.1137/14099872X
M3 - Article
AN - SCOPUS:84943243877
SN - 1536-0040
VL - 14
SP - 1478
EP - 1517
JO - SIAM Journal on Applied Dynamical Systems
JF - SIAM Journal on Applied Dynamical Systems
IS - 3
ER -