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2024
Exploring the genomic traits of infant-associated microbiota members from a Zimbabwean cohort
Mudhluli, T. E., Kujawska, M., Mueller, J., Felsl, A., Truppel, B. A., Hall, L. J., Chitsike, I., Gomo, E. & Zhou, D. T., Dez. 2024, in: BMC Genomics. 25, 1, 718.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access -
Transplanting human infant gut microbiome species into Galleria mellonella
Gooch, H. C. C., Labedan, M., Hall, L. J. & Maxwell, A., Dez. 2024, in: BMC Research Notes. 17, 1, 123.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access -
Unveiling the pathogenic mechanisms of Clostridium perfringens toxins and virulence factors
Camargo, A., Ramírez, J. D., Kiu, R., Hall, L. J. & Muñoz, M., 2024, in: Emerging Microbes and Infections. 13, 1, 2341968.Publikation: Beitrag in Fachzeitschrift › Übersichtsartikel › Begutachtung
Open Access5 Zitate (Scopus) -
2023
An efficient method for high molecular weight bacterial DNA extraction suitable for shotgun metagenomics from skin swabs
Serghiou, I. R., Baker, D., Evans, R., Dalby, M. J., Kiu, R., Trampari, E., Phillips, S., Watt, R., Atkinson, T., Murphy, B., Hall, L. J. & Webber, M. A., 1 Juli 2023, in: Microbial Genomics. 9, 7, 001058.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access2 Zitate (Scopus) -
2022
Editorial overview: current state and future of the microbiome field: why context matters
Hall, L. J. & Schirmer, M., Dez. 2022, in: Current Opinion in Microbiology. 70, 102200.Publikation: Beitrag in Fachzeitschrift › Leitartikel
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2021
The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life
on behalf of the PEARL study team, Dez. 2021, in: BMC Pediatrics. 21, 1, 357.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access1 Zitat (Scopus) -
2020
Bifidobacterium breve UCC2003 exopolysaccharide modulates the early life microbiota by acting as a potential dietary substrate
Püngel, D., Treveil, A., Dalby, M. J., Caim, S., Colquhoun, I. J., Booth, C., Ketskemety, J., Korcsmaros, T., van Sinderen, D., Lawson, M. A. E. & Hall, L. J., Apr. 2020, in: Nutrients. 12, 4, 948.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access23 Zitate (Scopus) -
Breast milk-derived human milk oligosaccharides promote Bifidobacterium interactions within a single ecosystem
Lawson, M. A. E., O’Neill, I. J., Kujawska, M., Gowrinadh Javvadi, S., Wijeyesekera, A., Flegg, Z., Chalklen, L. & Hall, L. J., 1 Feb. 2020, in: ISME Journal. 14, 2, S. 635-648 14 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access228 Zitate (Scopus) -
Improving causality in microbiome research: Can human genetic epidemiology help?
Wade, K. H. & Hall, L. J., 2020, in: Wellcome Open Research. 4, 199.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access29 Zitate (Scopus) -
Incidence of necrotising enterocolitis before and after introducing routine prophylactic Lactobacillus and Bifidobacterium probiotics
Robertson, C., Robertson, C., Savva, G. M., Clapuci, R., Jones, J., Maimouni, H., Brown, E., Minocha, A., Hall, L. J., Clarke, P. & Clarke, P., 1 Juli 2020, in: Archives of Disease in Childhood: Fetal and Neonatal Edition. 105, 4, S. 380-386 7 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access69 Zitate (Scopus) -
Preterm infants harbour diverse klebsiella populations, including atypical species that encode and produce an array of antimicrobial resistance-and virulence-associated factors
Chen, Y., Brook, T. C., Soe, C. Z., O'neill, I., Alcon-Giner, C., Leelastwattanagul, O., Phillips, S., Caim, S., Clarke, P., Hall, L. J. & Hoyles, L., 2020, in: Microbial Genomics. 6, 6, S. 1-20 20 S., 000377.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access39 Zitate (Scopus) -
Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens
Leggett, R. M., Alcon-Giner, C., Heavens, D., Caim, S., Brook, T. C., Kujawska, M., Martin, S., Peel, N., Acford-Palmer, H., Hoyles, L., Clarke, P., Hall, L. J. & Clark, M. D., 1 März 2020, in: Nature Microbiology. 5, 3, S. 430-442 13 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access103 Zitate (Scopus) -
Regulatory network analysis of Paneth cell and goblet cell enriched gut organoids using transcriptomics approaches
Treveil, A., Sudhakar, P., Matthews, Z. J., Wrzesiński, T., Jones, E. J., Brooks, J., Ölbei, M., Hautefort, I., Hall, L. J., Carding, S. R., Mayer, U., Powell, P. P., Wileman, T., Di Palma, F., Haerty, W. & Korcsmáros, T., Feb. 2020, in: Molecular Omics. 16, 1, S. 39-58 20 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access29 Zitate (Scopus) -
Setting the agenda for social science research on the human microbiome
Greenhough, B., Read, C. J., Lorimer, J., Lezaun, J., McLeod, C., Benezra, A., Bloomfield, S., Brown, T., Clinch, M., D’Acquisto, F., Dumitriu, A., Evans, J., Fawcett, N., Fortané, N., Hall, L. J., Giraldo Herrera, C. E., Hodgetts, T., Johnson, K. V. A., Kirchhelle, C. & Krzywoszynska, A. &7 mehr, , 1 Dez. 2020, in: Palgrave Communications. 6, 1, 18.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access37 Zitate (Scopus) -
The early life microbiota protects neonatal mice from pathological small intestinal epithelial cell shedding
Hughes, K. R., Schofield, Z., Dalby, M. J., Caim, S., Chalklen, L., Bernuzzi, F., Alcon-Giner, C., Le Gall, G., Watson, A. J. M. & Hall, L. J., 1 Mai 2020, in: FASEB Journal. 34, 5, S. 7075-7088 14 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access25 Zitate (Scopus) -
2019
Antibiotic use and the risk of rheumatoid arthritis: A population-based case-control study
Sultan, A. A., Mallen, C., Muller, S., Hider, S., Scott, I., Helliwell, T. & Hall, L. J., 7 Aug. 2019, in: BMC Medicine. 17, 1, 154.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access26 Zitate (Scopus) -
Draft genome sequence of raoultella ornithinolytica P079F W, isolated from the feces of a preterm infant
Chen, Y., Brook, T. C., Alcon-Giner, C., Clarke, P., Hall, L. J. & Hoyles, L., 15 Aug. 2019, in: Microbiology Resource Announcements. 8, 33, e0049319-19.Publikation: Beitrag in Fachzeitschrift › Übersichtsartikel › Begutachtung
Open Access2 Zitate (Scopus) -
Draft genome sequences of citrobacter freundii and citrobacter murliniae strains isolated from the feces of preterm infants
Chen, Y., Brook, T. C., Alcon-Giner, C., Clarke, P., Hall, L. J. & Hoyles, L., 15 Aug. 2019, in: Microbiology Resource Announcements. 8, 33, e0049419-19.Publikation: Beitrag in Fachzeitschrift › Übersichtsartikel › Begutachtung
Open Access5 Zitate (Scopus) -
Genomic analysis of clostridium perfringens BEC/CPILE-positive, toxinotype D and e strains isolated from healthy children
Kiu, R., Sim, K., Shaw, A., Cornwell, E., Pickard, D., Kroll, J. S. & Hall, L. J., 19 Sept. 2019, in: Toxins. 11, 9, 543.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access14 Zitate (Scopus) -
Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis
Kiu, R., Brown, J., Bedwell, H., Leclaire, C., Caim, S., Pickard, D., Dougan, G., Dixon, R. A. & Hall, L. J., Dez. 2019, in: Animal Microbiome. 1, 1, 12.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access26 Zitate (Scopus) -
Integrative analysis of Paneth cell proteomic and transcriptomic data from intestinal organoids reveals functional processes dependent on autophagy
Jones, E. J., Matthews, Z. J., Gul, L., Sudhakar, P., Treveil, A., Divekar, D., Buck, J., Wrzesinski, T., Jefferson, M., Armstrong, S. D., Hall, L. J., Watson, A. J. M., Carding, S. R., Haerty, W., Palma, F. D., Mayer, U., Powell, P. P., Hautefort, I., Wileman, T. & Korcsmaros, T., März 2019, in: DMM Disease Models and Mechanisms. 12, 3, dmm037069.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access19 Zitate (Scopus) -
Phylogenomic analysis of gastroenteritis-associated clostridium perfringens in england and wales over a 7-year period indicates distribution of clonal toxigenic strains in multiple outbreaks and extensive involvement of enterotoxin-encoding (Cpe) plasmids
Kiu, R., Caim, S., Painset, A., Pickard, D., Swift, C., Dougan, G., Mather, A. E., Amar, C. & Hall, L. J., 2019, in: Microbial Genomics. 5, 10, 000297.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access18 Zitate (Scopus) -
Streaming histogram sketching for rapid microbiome analytics
Rowe, W. P., Carrieri, A. P., Alcon-Giner, C., Caim, S., Shaw, A., Sim, K., Kroll, J. S., Hall, L. J., Pyzer-Knapp, E. O. & Winn, M. D., 16 März 2019, in: Microbiome. 7, 1, 40.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access13 Zitate (Scopus) -
The impact of storage conditions on human stool 16S rRNA microbiome composition and diversity
Carruthers, L. V., Moses, A., Adriko, M., Faust, C. L., Tukahebwa, E. M., Hall, L. J., Ranford-Cartwright, L. C. & Lamberton, P. H. L., 2019, in: PeerJ. 2019, 12, e8133.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access21 Zitate (Scopus) -
The microbiota, antibiotics and breast cancer
McKee, A. M., Hall, L. J. & Robinson, S. D., 2019, in: Breast Cancer Management. 8, 3, BMT29.Publikation: Beitrag in Fachzeitschrift › Leitartikel
Open Access7 Zitate (Scopus) -
2018
Antibiotics induce sustained dysregulation of intestinal T cell immunity by perturbing macrophage homeostasis
Scott, N. A., Andrusaite, A., Andersen, P., Lawson, M., Alcon-Giner, C., Leclaire, C., Caim, S., Le Gall, G., Shaw, T., Connolly, J. P. R., Roe, A. J., Wessel, H., Bravo-Blas, A., Thomson, C. A., Kästele, V., Wang, P., Peterson, D. A., Bancroft, A., Li, X. & Grencis, R. &5 mehr, , 24 Okt. 2018, in: Science Translational Medicine. 10, 464, eaao4755.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access228 Zitate (Scopus) -
An update on the human and animal enteric pathogen Clostridium perfringens
Kiu, R. & Hall, L. J., 1 Dez. 2018, in: Emerging Microbes and Infections. 7, 1, 141.Publikation: Beitrag in Fachzeitschrift › Übersichtsartikel › Begutachtung
Open Access299 Zitate (Scopus) -
Response: Commentary: Probing genomic aspects of the multi-host pathogen clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors
Kiu, R. & Hall, L. J., 16 Aug. 2018, in: Frontiers in Microbiology. 9, AUG, 1857.Publikation: Beitrag in Fachzeitschrift › Kommentar/Debatte
Open Access2 Zitate (Scopus) -
2017
Bifidobacterium breve reduces apoptotic epithelial cell shedding in an exopolysaccharide and MyD88-dependent manner
Hughes, K. R., Harnisch, L. C., Alcon-Giner, C., Mitra, S., Wright, C. J., Ketskemety, J., Van Sinderen, D., Watson, A. J. M. & Hall, L. J., 2017, in: Open Biology. 7, 1, 160155.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access54 Zitate (Scopus) -
Exploring the role of the microbiota member Bifidobacterium in modulating immune-linked diseases
O'Neill, I., Schofield, Z. & Hall, L. J., Nov. 2017, in: Emerging Topics in Life Sciences. 1, 4, S. 333-349 17 S.Publikation: Beitrag in Fachzeitschrift › Übersichtsartikel › Begutachtung
Open Access73 Zitate (Scopus) -
Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants
Alcon-Giner, C., Caim, S., Mitra, S., Ketskemety, J., Wegmann, U., Wain, J., Belteki, G., Clarke, P. & Hall, L. J., 2 Nov. 2017, in: BMC Genomics. 18, 1, 841.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access38 Zitate (Scopus) -
Preterm infant-associated clostridium tertium, clostridium cadaveris, and clostridium paraputrificum strains: Genomic and evolutionary insights
Kiu, R., Caim, S., Alcon-Giner, C., Belteki, G., Clarke, P., Pickard, D., Dougan, G. & Hall, L. J., 1 Okt. 2017, in: Genome Biology and Evolution. 9, 10, S. 2707-2714 8 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access40 Zitate (Scopus) -
Probing genomic aspects of the multi-host pathogen Clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors
Kiu, R., Caim, S., Alexander, S., Pachori, P. & Hall, L. J., 12 Dez. 2017, in: Frontiers in Microbiology. 8, DEC, 2485.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access65 Zitate (Scopus) -
The microbiome beyond the horizon of ecological and evolutionary theory
Koskella, B., Hall, L. J. & Metcalf, C. J. E., 1 Nov. 2017, in: Nature Ecology and Evolution. 1, 11, S. 1606-1615 10 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
180 Zitate (Scopus) -
2015
Non-viral immune electrogene therapy induces potent antitumour responses and has a curative effect in murine colon adenocarcinoma and melanoma cancer models
Forde, P. F., Hall, L. J., De Kruijf, M., Bourke, M. G., Doddy, T., Sadadcharam, M. & Soden, D. M., 10 Jan. 2015, in: Gene Therapy. 22, 1, S. 29-39 11 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access4 Zitate (Scopus) -
2014
Development and characterization of an enhanced nonviral expression vector for electroporation cancer treatment
Forde, P. F., Hall, L. J., Sadadcharam, M., De Kruijf, M., O'Sullivan, G. C. & Soden, D. M., 8 Jan. 2014, in: Molecular Therapy - Methods and Clinical Development. 1, S. 14012 1 S., 14012.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access6 Zitate (Scopus) -
Enhancement of electroporation facilitated immunogene therapy via T-reg depletion
Forde, P. F., Sadadcharam, M., Hall, L. J., O'Donovan, T. R., De Kruijf, M., Byrne, W. L., O'Sullivan, G. C. & Soden, D. M., Aug. 2014, in: Cancer Gene Therapy. 21, 8, S. 349-354 6 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access11 Zitate (Scopus) -
Gut microbiome in new-onset crohn's disease
Hall, L. J., Walshaw, J. & Watson, A. J. M., 1 Okt. 2014, in: Gastroenterology. 147, 4, S. 932-934 3 S.Publikation: Beitrag in Fachzeitschrift › Kommentar/Debatte
Open Access17 Zitate (Scopus) -
2013
A mouse model of pathological small intestinal epithelial cell apoptosis and shedding induced by systemic administration of lipopolysaccharide
Williams, J. M., Duckworth, C. A., Watson, A. J. M., Frey, M. R., Miguel, J. C., Burkitt, M. D., Sutton, R., Hughes, K. R., Hall, L. J., Caamaño, J. H., Campbell, B. J. & Pritchard, D. M., Nov. 2013, in: DMM Disease Models and Mechanisms. 6, 6, S. 1388-1399 12 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access146 Zitate (Scopus) -
Natural killer cells protect against mucosal and systemic infection with the enteric pathogen citrobacter rodentium
Hall, L. J., Murphy, C. T., Hurley, G., Quinlan, A., Shanahan, F., Nally, K. & Melgar, S., Feb. 2013, in: Infection and Immunity. 81, 2, S. 460-469 10 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access52 Zitate (Scopus) -
Natural killer cells protect mice from DSS-induced colitis by regulating neutrophil function via the NKG2A receptor
Hall, L. J., Murphy, C. T., Quinlan, A., Hurley, G., Shanahan, F., Nally, K. & Melgar, S., Sept. 2013, in: Mucosal Immunology. 6, 5, S. 1016-1026 11 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access48 Zitate (Scopus) -
Regulation of host gene expression by gut microbiota
Watson, A. J. M. & Hall, L. J., Apr. 2013, in: Gastroenterology. 144, 4, S. 841-844 4 S.Publikation: Beitrag in Fachzeitschrift › Kommentar/Debatte
Open Access2 Zitate (Scopus) -
2012
Bifidobacterial surface-exopolysaccharide facilitates commensal-host interaction through immune modulation and pathogen protection
Fanning, S., Hall, L. J., Cronin, M., Zomer, A., MacSharry, J., Goulding, D., Motherway, M. O. C., Shanahan, F., Nally, K., Dougan, G. & Van Sinderen, D., 7 Feb. 2012, in: Proceedings of the National Academy of Sciences of the United States of America. 109, 6, S. 2108-2113 6 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access446 Zitate (Scopus) -
Bifidobacterium breve UCC2003 surface exopolysaccharide production is a beneficial trait mediating commensal-host interaction through immune modulation and pathogen protection
Fanning, S., Hall, L. J. & van Sinderen, D., 2012, in: Gut Microbes. 3, 5, S. 420-425 6 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access70 Zitate (Scopus) -
Cell shedding: Old questions answered
Watson, A. J. M., Hall, L. J. & Hughes, K. R., Nov. 2012, in: Gastroenterology. 143, 5, S. 1389-1391 3 S.Publikation: Beitrag in Fachzeitschrift › Kommentar/Debatte
Open Access6 Zitate (Scopus) -
Role of autophagy in NOD2-induced inflammation in Crohn's disease
Hall, L. J. & Watson, A. J. M., Apr. 2012, in: Gastroenterology. 142, 4, S. 1032-1034 3 S.Publikation: Beitrag in Fachzeitschrift › Kommentar/Debatte
Open Access3 Zitate (Scopus) -
The sphingosine-1-phosphate analogue FTY720 impairs mucosal immunity and clearance of the enteric pathogen Citrobacter rodentium
Murphy, C. T., Hall, L. J., Hurley, G., Quinlan, A., MacSharry, J., Shanahan, F., Nally, K. & Melgar, S., Aug. 2012, in: Infection and Immunity. 80, 8, S. 2712-2723 12 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access24 Zitate (Scopus) -
2011
A salmonella typhimurium-typhi genomic chimera: A model to study vi polysaccharide capsule function in vivo
Jansen, A. M., Hall, L. J., Clare, S., Goulding, D., Holt, K. E., Grant, A. J., Mastroeni, P., Dougan, G. & Kingsley, R. A., Juli 2011, in: PLoS Pathogens. 7, 7, e1002131.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
Open Access41 Zitate (Scopus) -
Induction and activation of adaptive immune populations during acute and chronic phases of a murine model of experimental colitis
Hall, L. J., Faivre, E., Quinlan, A., Shanahan, F., Nally, K. & Melgar, S., Jan. 2011, in: Digestive Diseases and Sciences. 56, 1, S. 79-89 11 S.Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung
86 Zitate (Scopus) -
Live vaccines and their role in modern vaccinology
Dougan, G., Goulding, D. & Hall, L. J., 2011, Replicating Vaccines. Dormitzer, P., Rappuoli, R. & Mandl, C. (Hrsg.). S. 3-14 12 S. (Birkhauser Advances in Infectious Diseases).Publikation: Beitrag in Buch/Bericht/Konferenzband › Kapitel › Begutachtung