Björn Menze

Prof. Dr. rer. nat.

20052025

Publikationen pro Jahr

Suchergebnisse

  • 2025

    Denoising Diffusion Models for 3D Healthy Brain Tissue Inpainting

    Durrer, A., Wolleb, J., Bieder, F., Friedrich, P., Melie-Garcia, L., Ocampo Pineda, M. A., Bercea, C. I., Hamamci, I. E., Wiestler, B., Piraud, M., Yaldizli, O., Granziera, C., Menze, B., Cattin, P. C. & Kofler, F., 2025, Deep Generative Models - 4th MICCAI Workshop, DGM4MICCAI 2024, Held in Conjunction with MICCAI 2024, Proceedings. Mukhopadhyay, A., Oksuz, I., Engelhardt, S., Mehrof, D. & Yuan, Y. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 87-97 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15224 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • GenerateCT: Text-Conditional Generation of 3D Chest CT Volumes

    Hamamci, I. E., Er, S., Sekuboyina, A., Simsar, E., Tezcan, A., Simsek, A. G., Esirgun, S. N., Almas, F., Doğan, I., Dasdelen, M. F., Prabhakar, C., Reynaud, H., Pati, S., Bluethgen, C., Ozdemir, M. K. & Menze, B., 2025, Computer Vision – ECCV 2024 - 18th European Conference, Proceedings. Leonardis, A., Ricci, E., Roth, S., Russakovsky, O., Sattler, T. & Varol, G. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 126-143 18 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15137 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • GRAtt-VIS: Gated Residual Attention for Video Instance Segmentation

    Hannan, T., Koner, R., Bernhard, M., Shit, S., Menze, B., Tresp, V., Schubert, M. & Seidl, T., 2025, Pattern Recognition - 27th International Conference, ICPR 2024, Proceedings. Antonacopoulos, A., Chaudhuri, S., Chellappa, R., Liu, C.-L., Bhattacharya, S. & Pal, U. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 268-282 15 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15316 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • Personalized predictions of Glioblastoma infiltration: Mathematical models, Physics-Informed Neural Networks and multimodal scans

    Zhang, R. Z., Ezhov, I., Balcerak, M., Zhu, A., Wiestler, B., Menze, B. & Lowengrub, J. S., Apr. 2025, in: Medical Image Analysis. 101, 103423.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
  • StoDIP: Efficient 3D MRF Image Reconstruction with Deep Image Priors and Stochastic Iterations

    Mayo, P., Cencini, M., Pirkl, C. M., Menzel, M. I., Tosetti, M., Menze, B. H. & Golbabaee, M., 2025, Machine Learning in Medical Imaging - 15th International Workshop, MLMI 2024, Held in Conjunction with MICCAI 2024, Proceedings. Xu, X., Cui, Z., Sun, K., Rekik, I. & Ouyang, X. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 128-137 10 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15242 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • 2024

    A Dempster-Shafer Approach to Trustworthy AI With Application to Fetal Brain MRI Segmentation

    Fidon, L., Aertsen, M., Kofler, F., Bink, A., David, A. L., Deprest, T., Emam, D., Guffens, F., Jakab, A., Kasprian, G., Kienast, P., Melbourne, A., Menze, B., Mufti, N., Pogledic, I., Prayer, D., Stuempflen, M., Van Elslander, E., Ourselin, S. & Deprest, J. &1 mehr, Vercauteren, T., 1 Mai 2024, in: IEEE Transactions on Pattern Analysis and Machine Intelligence. 46, 5, S. 3784-3795 12 S., 10388220.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    9 Zitate (Scopus)
  • A Learnable Prior Improves Inverse Tumor Growth Modeling

    Weidner, J., Ezhov, I., Balcerak, M., Metz, M. C., Litvinov, S., Kaltenbach, S., Feiner, L., Lux, L., Kofler, F., Lipkova, J., Latz, J., Rueckert, D., Menze, B. & Wiestler, B., 2024, (Angenommen/Im Druck) in: IEEE Transactions on Medical Imaging.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
  • A multi-institutional meningioma MRI dataset for automated multi-sequence image segmentation

    LaBella, D., Khanna, O., McBurney-Lin, S., Mclean, R., Nedelec, P., Rashid, A. S., Tahon, N. H., Altes, T., Baid, U., Bhalerao, R., Dhemesh, Y., Floyd, S., Godfrey, D., Hilal, F., Janas, A., Kazerooni, A., Kent, C., Kirkpatrick, J., Kofler, F. & Leu, K. &54 mehr, Maleki, N., Menze, B., Pajot, M., Reitman, Z. J., Rudie, J. D., Saluja, R., Velichko, Y., Wang, C., Warman, P. I., Sollmann, N., Diffley, D., Nandolia, K. K., Warren, D. I., Hussain, A., Fehringer, J. P., Bronstein, Y., Deptula, L., Stein, E. G., Taherzadeh, M., Portela de Oliveira, E., Haughey, A., Kontzialis, M., Saba, L., Turner, B., Brüßeler, M. M. T., Ansari, S., Gkampenis, A., Weiss, D. M., Mansour, A., Shawali, I. H., Yordanov, N., Stein, J. M., Hourani, R., Moshebah, M. Y., Abouelatta, A. M., Rizvi, T., Willms, K., Martin, D. C., Okar, A., D’Anna, G., Taha, A., Sharifi, Y., Faghani, S., Kite, D., Pinho, M., Haider, M. A., Alonso-Basanta, M., Villanueva-Meyer, J., Rauschecker, A. M., Nada, A., Aboian, M., Flanders, A., Bakas, S. & Calabrese, E., Dez. 2024, in: Scientific Data. 11, 1, 496.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    1 Zitat (Scopus)
  • A new protocol for multispecies bacterial infections in zebrafish and their monitoring through automated image analysis

    Schmitz, D. A., Wechsler, T., Li, H. B., Menze, B. H. & Kümmerli, R., Aug. 2024, in: PLoS ONE. 19, 8, e0304827.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    2 Zitate (Scopus)
  • Bessel beam optical coherence microscopy enables multiscale assessment of cerebrovascular network morphology and function

    Glandorf, L., Wittmann, B., Droux, J., Glück, C., Weber, B., Wegener, S., El Amki, M., Leitgeb, R., Menze, B. & Razansky, D., Dez. 2024, in: Light: Science and Applications. 13, 1, 307.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
  • Corrigendum to “Detection and analysis of cerebral aneurysms based on X-ray rotational angiography - the CADA 2020 challenge” [Medical Image Analysis, April 2022, Volume 77, 102333] (Medical Image Analysis (2022) 77, (S1361841521003789), (10.1016/j.media.2021.102333))

    Ivantsits, M., Goubergrits, L., Kuhnigk, J. M., Huellebrand, M., Bruening, J., Kossen, T., Pfahringer, B., Schaller, J., Spuler, A., Kuehne, T., Jia, Y., Li, X., Shit, S., Menze, B., Su, Z., Ma, J., Nie, Z., Jain, K., Liu, Y. & Lin, Y. &1 mehr, Hennemuth, A., Feb. 2025, in: Medical Image Analysis. 100, 103363.

    Publikation: Beitrag in FachzeitschriftKommentar/Debatte

  • CT2Rep: Automated Radiology Report Generation for 3D Medical Imaging

    Hamamci, I. E., Er, S. & Menze, B., 2024, Medical Image Computing and Computer Assisted Intervention – MICCAI 2024 - 27th International Conference, Proceedings. Linguraru, M. G., Dou, Q., Feragen, A., Giannarou, S., Glocker, B., Lekadir, K. & Schnabel, J. A. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 476-486 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15012 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • Deep Image Priors for Magnetic Resonance Fingerprinting with Pretrained Bloch-Consistent Denoising Autoencoders

    Mayo, P., Cencini, M., Fatania, K., Pirkl, C. M., Menzel, M. I., Menze, B. H., Tosetti, M. & Golbabaee, M., 2024, IEEE International Symposium on Biomedical Imaging, ISBI 2024 - Conference Proceedings. IEEE Computer Society, (Proceedings - International Symposium on Biomedical Imaging).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • Development and benchmarking of a Deep Learning-based MRI-guided gross tumor segmentation algorithm for Radiomics analyses in extremity soft tissue sarcomas

    Peeken, J. C., Etzel, L., Tomov, T., Münch, S., Schüttrumpf, L., Shaktour, J. H., Kiechle, J., Knebel, C., Schaub, S. K., Mayr, N. A., Woodruff, H. C., Lambin, P., Gersing, A. S., Bernhardt, D., Nyflot, M. J., Menze, B., Combs, S. E. & Navarro, F., Aug. 2024, in: Radiotherapy and Oncology. 197, 110338.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    1 Zitat (Scopus)
  • Editorial for the Special Issue on the 2022 Medical Imaging with Deep Learning Conference

    Albarqouni, S., Baumgartner, C., Dou, Q., Konukoglu, E., Menze, B. & Venkataraman, A., Dez. 2024, in: Medical Image Analysis. 98, 103308.

    Publikation: Beitrag in FachzeitschriftLeitartikel

  • Joint-individual fusion structure with fusion attention module for multi-modal skin cancer classification

    Tang, P., Yan, X., Nan, Y., Hu, X., Menze, B. H., Krammer, S. & Lasser, T., Okt. 2024, in: Pattern Recognition. 154, 110604.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    1 Zitat (Scopus)
  • Learning continuous shape priors from sparse data with neural implicit functions

    Amiranashvili, T., Lüdke, D., Li, H. B., Zachow, S. & Menze, B. H., Mai 2024, in: Medical Image Analysis. 94, 103099.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    4 Zitate (Scopus)
  • Link Prediction for Flow-Driven Spatial Networks

    Wittmann, B., Paetzold, J. C., Prabhakar, C., Rueckert, D. & Menze, B., 2024, Proceedings - 2024 IEEE Winter Conference on Applications of Computer Vision, WACV 2024. Institute of Electrical and Electronics Engineers Inc., S. 2460-2469 10 S. (Proceedings - 2024 IEEE Winter Conference on Applications of Computer Vision, WACV 2024).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

    Open Access
    3 Zitate (Scopus)
  • LST-AI: A deep learning ensemble for accurate MS lesion segmentation

    Wiltgen, T., McGinnis, J., Schlaeger, S., Kofler, F., Voon, C. C., Berthele, A., Bischl, D., Grundl, L., Will, N., Metz, M., Schinz, D., Sepp, D., Prucker, P., Schmitz-Koep, B., Zimmer, C., Menze, B., Rueckert, D., Hemmer, B., Kirschke, J. & Mühlau, M. &1 mehr, Wiestler, B., Jan. 2024, in: NeuroImage: Clinical. 42, 103611.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    4 Zitate (Scopus)
  • Machine Learning Analysis of Human Skin by Optoacoustic Mesoscopy for Automated Extraction of Psoriasis and Aging Biomarkers

    He, H., Paetzold, J. C., Borner, N., Riedel, E., Gerl, S., Schneider, S., Fisher, C., Ezhov, I., Shit, S., Li, H., Ruckert, D., Aguirre, J., Biedermann, T., Darsow, U., Menze, B. & Ntziachristos, V., 1 Juni 2024, in: IEEE Transactions on Medical Imaging. 43, 6, S. 2074-2085 12 S.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    4 Zitate (Scopus)
  • MedShapeNet - a large-scale dataset of 3D medical shapes for computer vision

    Li, J., Zhou, Z., Yang, J., Pepe, A., Gsaxner, C., Luijten, G., Qu, C., Zhang, T., Chen, X., Li, W., Wodzinski, M., Friedrich, P., Xie, K., Jin, Y., Ambigapathy, N., Nasca, E., Solak, N., Melito, G. M., Vu, V. D. & Memon, A. R. &137 mehr, Schlachta, C., De Ribaupierre, S., Patel, R., Eagleson, R., Chen, X., Mächler, H., Kirschke, J. S., De La Rosa, E., Christ, P. F., Li, H. B., Ellis, D. G., Aizenberg, M. R., Gatidis, S., Küstner, T., Shusharina, N., Heller, N., Andrearczyk, V., Depeursinge, A., Hatt, M., Sekuboyina, A., Löffler, M. T., Liebl, H., Dorent, R., Vercauteren, T., Shapey, J., Kujawa, A., Cornelissen, S., Langenhuizen, P., Ben-Hamadou, A., Rekik, A., Pujades, S., Boyer, E., Bolelli, F., Grana, C., Lumetti, L., Salehi, H., Ma, J., Zhang, Y., Gharleghi, R., Beier, S., Sowmya, A., Garza-Villarreal, E. A., Balducci, T., Angeles-Valdez, D., Souza, R., Rittner, L., Frayne, R., Ji, Y., Ferrari, V., Chatterjee, S., Dubost, F., Schreiber, S., Mattern, H., Speck, O., Haehn, D., John, C., Nürnberger, A., Pedrosa, J., Ferreira, C., Aresta, G., Cunha, A., Campilho, A., Suter, Y., Garcia, J., Lalande, A., Vandenbossche, V., Van Oevelen, A., Duquesne, K., Mekhzoum, H., Vandemeulebroucke, J., Audenaert, E., Krebs, C., Van Leeuwen, T., Vereecke, E., Heidemeyer, H., Röhrig, R., Hölzle, F., Badeli, V., Krieger, K., Gunzer, M., Chen, J., Van Meegdenburg, T., Dada, A., Balzer, M., Fragemann, J., Jonske, F., Rempe, M., Malorodov, S., Bahnsen, F. H., Seibold, C., Jaus, A., Marinov, Z., Jaeger, P. F., Stiefelhagen, R., Santos, A. S., Lindo, M., Ferreira, A., Alves, V., Kamp, M., Abourayya, A., Nensa, F., Hörst, F., Brehmer, A., Heine, L., Hanusrichter, Y., Weßling, M., Dudda, M., Podleska, L. E., Fink, M. A., Keyl, J., Tserpes, K., Kim, M. S., Elhabian, S., Lamecker, H., Zukić, D. E., Paniagua, B., Wachinger, C., Urschler, M., Duong, L., Wasserthal, J., Hoyer, P. F., Basu, O., Maal, T., Witjes, M. J. H., Schiele, G., Chang, T. C., Ahmadi, S. A., Luo, P., Menze, B., Reyes, M., Deserno, T. M., Davatzikos, C., Puladi, B., Fua, P., Yuille, A. L., Kleesiek, J. & Egger, J., 2024, (Angenommen/Im Druck) in: Biomedizinische Technik.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

  • Metrics reloaded: recommendations for image analysis validation

    Maier-Hein, L., Reinke, A., Godau, P., Tizabi, M. D., Buettner, F., Christodoulou, E., Glocker, B., Isensee, F., Kleesiek, J., Kozubek, M., Reyes, M., Riegler, M. A., Wiesenfarth, M., Kavur, A. E., Sudre, C. H., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Rädsch, T. & Acion, L. &53 mehr, Antonelli, M., Arbel, T., Bakas, S., Benis, A., Blaschko, M. B., Cardoso, M. J., Cheplygina, V., Cimini, B. A., Collins, G. S., Farahani, K., Ferrer, L., Galdran, A., van Ginneken, B., Haase, R., Hashimoto, D. A., Hoffman, M. M., Huisman, M., Jannin, P., Kahn, C. E., Kainmueller, D., Kainz, B., Karargyris, A., Karthikesalingam, A., Kofler, F., Kopp-Schneider, A., Kreshuk, A., Kurc, T., Landman, B. A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A. L., Mattson, P., Meijering, E., Menze, B., Moons, K. G. M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rajpoot, N., Rieke, N., Saez-Rodriguez, J., Sánchez, C. I., Shetty, S., van Smeden, M., Summers, R. M., Taha, A. A., Tiulpin, A., Tsaftaris, S. A., Van Calster, B., Varoquaux, G. & Jäger, P. F., Feb. 2024, in: Nature Methods. 21, 2, S. 195-212 18 S.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    70 Zitate (Scopus)
  • Radiomics-based prediction of local control in patients with brain metastases following postoperative stereotactic radiotherapy

    Buchner, J. A., Kofler, F., Mayinger, M., Christ, S. M., Brunner, T. B., Wittig, A., Menze, B., Zimmer, C., Meyer, B., Guckenberger, M., Andratschke, N., El Shafie, R. A., Debus, J., Rogers, S., Riesterer, O., Schulze, K., Feldmann, H. J., Blanck, O., Zamboglou, C. & Ferentinos, K. &10 mehr, Bilger-Zähringer, A., Grosu, A. L., Wolff, R., Piraud, M., Eitz, K. A., Combs, S. E., Bernhardt, D., Rueckert, D., Wiestler, B. & Peeken, J. C., 1 Sept. 2024, in: Neuro-Oncology. 26, 9, S. 1638-1650 13 S.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    2 Zitate (Scopus)
  • Simulation-Based Segmentation of Blood Vessels in Cerebral 3D OCTA Images

    Wittmann, B., Glandorf, L., Paetzold, J. C., Amiranashvili, T., Wälchli, T., Razansky, D. & Menze, B., 2024, Medical Image Computing and Computer Assisted Intervention – MICCAI 2024 - 27th International Conference, Proceedings. Linguraru, M. G., Dou, Q., Feragen, A., Giannarou, S., Glocker, B., Lekadir, K. & Schnabel, J. A. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 645-655 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 15008 LNCS).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

  • SPINEPS—automatic whole spine segmentation of T2-weighted MR images using a two-phase approach to multi-class semantic and instance segmentation

    Möller, H., Graf, R., Schmitt, J., Keinert, B., Schön, H., Atad, M., Sekuboyina, A., Streckenbach, F., Kofler, F., Kroencke, T., Bette, S., Willich, S. N., Keil, T., Niendorf, T., Pischon, T., Endemann, B., Menze, B., Rueckert, D. & Kirschke, J. S., 2024, (Angenommen/Im Druck) in: European Radiology.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
  • Synthetic Optical Coherence Tomography Angiographs for Detailed Retinal Vessel Segmentation Without Human Annotations

    Kreitner, L., Paetzold, J. C., Rauch, N., Chen, C., Hagag, A. M., Fayed, A. E., Sivaprasad, S., Rausch, S., Weichsel, J., Menze, B. H., Harders, M., Knier, B., Rueckert, D. & Menten, M. J., 1 Juni 2024, in: IEEE Transactions on Medical Imaging. 43, 6, S. 2061-2073 13 S.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    14 Zitate (Scopus)
  • Toward image-based personalization of glioblastoma therapy: A clinical and biological validation study of a novel, deep learning-driven tumor growth model

    Metz, M. C., Ezhov, I., Peeken, J. C., Buchner, J. A., Lipkova, J., Kofler, F., Waldmannstetter, D., Delbridge, C., Diehl, C., Bernhardt, D., Schmidt-Graf, F., Gempt, J., Combs, S. E., Zimmer, C., Menze, B. & Wiestler, B., 1 Jan. 2024, in: Neuro-Oncology Advances. 6, 1, vdad171.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    1 Zitat (Scopus)
  • Understanding metric-related pitfalls in image analysis validation

    Reinke, A., Tizabi, M. D., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Kavur, A. E., Rädsch, T., Sudre, C. H., Acion, L., Antonelli, M., Arbel, T., Bakas, S., Benis, A., Buettner, F., Cardoso, M. J., Cheplygina, V., Chen, J., Christodoulou, E., Cimini, B. A. & Farahani, K. &50 mehr, Ferrer, L., Galdran, A., van Ginneken, B., Glocker, B., Godau, P., Hashimoto, D. A., Hoffman, M. M., Huisman, M., Isensee, F., Jannin, P., Kahn, C. E., Kainmueller, D., Kainz, B., Karargyris, A., Kleesiek, J., Kofler, F., Kooi, T., Kopp-Schneider, A., Kozubek, M., Kreshuk, A., Kurc, T., Landman, B. A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A. L., Meijering, E., Menze, B., Moons, K. G. M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rafelski, S. M., Rajpoot, N., Reyes, M., Riegler, M. A., Rieke, N., Saez-Rodriguez, J., Sánchez, C. I., Shetty, S., Summers, R. M., Taha, A. A., Tiulpin, A., Tsaftaris, S. A., Van Calster, B., Varoquaux, G., Yaniv, Z. R., Jäger, P. F. & Maier-Hein, L., Feb. 2024, in: Nature Methods. 21, 2, S. 182-194 13 S.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    31 Zitate (Scopus)
  • Virtual reality-empowered deep-learning analysis of brain cells

    Kaltenecker, D., Al-Maskari, R., Negwer, M., Hoeher, L., Kofler, F., Zhao, S., Todorov, M., Rong, Z., Paetzold, J. C., Wiestler, B., Piraud, M., Rueckert, D., Geppert, J., Morigny, P., Rohm, M., Menze, B. H., Herzig, S., Berriel Diaz, M. & Ertürk, A., 2024, (Angenommen/Im Druck) in: Nature Methods.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    6 Zitate (Scopus)
  • Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021

    ALFA study, Jan. 2024, in: Medical Image Analysis. 91, 103029.

    Publikation: Beitrag in FachzeitschriftKurzer AbrissBegutachtung

    Open Access
    8 Zitate (Scopus)
  • 2023

    A deep learning approach to predict collateral flow in stroke patients using radiomic features from perfusion images

    Tetteh, G., Navarro, F., Meier, R., Kaesmacher, J., Paetzold, J. C., Kirschke, J. S., Zimmer, C., Wiest, R. & Menze, B. H., 2023, in: Frontiers in Neurology. 14, 1039693.

    Publikation: Beitrag in FachzeitschriftArtikelBegutachtung

    Open Access
    7 Zitate (Scopus)
  • Approaching Peak Ground Truth

    Kofler, F., Wahle, J., Ezhov, I., Wagner, S. J., Al-Maskari, R., Gryska, E., Todorov, M., Bukas, C., Meissen, F., Peng, T., Erturk, A., Rueckert, D., Heckemann, R., Kirschke, J., Zimmer, C., Wiestler, B., Menze, B. & Piraud, M., 2023, 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023. IEEE Computer Society, (Proceedings - International Symposium on Biomedical Imaging; Band 2023-April).

    Publikation: Beitrag in Buch/Bericht/KonferenzbandKonferenzbeitragBegutachtung

    Open Access
    2 Zitate (Scopus)
  • Author Correction: Federated learning enables big data for rare cancer boundary detection (Nature Communications, (2022), 13, 1, (7346), 10.1038/s41467-022-33407-5)

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  • Automated segmentation of the human supraclavicular fat depot via deep neural network in water-fat separated magnetic resonance images

    Zhao, Y., Tang, C., Cui, B., Somasundaram, A., Raspe, J., Hu, X., Holzapfel, C., Junker, D., Hauner, H., Menze, B., Wu, M. & Karampinos, D., Juli 2023, in: Quantitative Imaging in Medicine and Surgery. 13, 7, S. 4699-4715 17 S.

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  • blob loss: Instance Imbalance Aware Loss Functions for Semantic Segmentation

    Kofler, F., Shit, S., Ezhov, I., Fidon, L., Horvath, I., Al-Maskari, R., Li, H. B., Bhatia, H., Loehr, T., Piraud, M., Erturk, A., Kirschke, J., Peeken, J. C., Vercauteren, T., Zimmer, C., Wiestler, B. & Menze, B., 2023, Information Processing in Medical Imaging - 28th International Conference, IPMI 2023, Proceedings. Frangi, A., de Bruijne, M., Wassermann, D. & Navab, N. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 755-767 13 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 13939 LNCS).

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    Kofler, F., Ezhov, I., Fidon, L., Horvath, I., de la Rosa, E., LaMaster, J., Li, H., Finck, T., Shit, S., Paetzold, J., Bakas, S., Piraud, M., Kirschke, J., Vercauteren, T., Zimmer, C., Wiestler, B. & Menze, B., 2023, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 8th International Workshop, BrainLes 2022, Held in Conjunction with MICCAI 2022, Revised Selected Papers. Bakas, S., Baid, U., Baheti, B., Crimi, A., Malec, S., Pytlarz, M., Zenk, M. & Dorent, R. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 3-13 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 13769 LNCS).

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  • Denoising diffusion-based MRI to CT image translation enables automated spinal segmentation

    Graf, R., Schmitt, J., Schlaeger, S., Möller, H. K., Sideri-Lampretsa, V., Sekuboyina, A., Krieg, S. M., Wiestler, B., Menze, B., Rueckert, D. & Kirschke, J. S., Dez. 2023, in: European Radiology Experimental. 7, 1, 70.

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  • Detecting CTP truncation artifacts in acute stroke imaging from the arterial input and the vascular output functions

    de la Rosa, E., Sima, D. M., Kirschke, J. S., Menze, B. & Robben, D., März 2023, in: PLoS ONE. 18, 3 March, e0283610.

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  • Development and external validation of an MRI-based neural network for brain metastasis segmentation in the AURORA multicenter study

    Buchner, J. A., Kofler, F., Etzel, L., Mayinger, M., Christ, S. M., Brunner, T. B., Wittig, A., Menze, B., Zimmer, C., Meyer, B., Guckenberger, M., Andratschke, N., El Shafie, R. A., Debus, J., Rogers, S., Riesterer, O., Schulze, K., Feldmann, H. J., Blanck, O. & Zamboglou, C. &7 mehr, Ferentinos, K., Wolff, R., Eitz, K. A., Combs, S. E., Bernhardt, D., Wiestler, B. & Peeken, J. C., Jan. 2023, in: Radiotherapy and Oncology. 178, 109425.

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  • Diffusion-Based Hierarchical Multi-label Object Detection to Analyze Panoramic Dental X-Rays

    Hamamci, I. E., Er, S., Simsar, E., Sekuboyina, A., Gundogar, M., Stadlinger, B., Mehl, A. & Menze, B., 2023, Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 - 26th International Conference, Proceedings. Greenspan, H., Greenspan, H., Madabhushi, A., Mousavi, P., Salcudean, S., Duncan, J., Syeda-Mahmood, T. & Taylor, R. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 389-399 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 14225 LNCS).

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    Payette, K., Li, H. B., de Dumast, P., Licandro, R., Ji, H., Siddiquee, M. M. R., Xu, D., Myronenko, A., Liu, H., Pei, Y., Wang, L., Peng, Y., Xie, J., Zhang, H., Dong, G., Fu, H., Wang, G., Rieu, Z. H., Kim, D. & Kim, H. G. &38 mehr, Karimi, D., Gholipour, A., Torres, H. R., Oliveira, B., Vilaça, J. L., Lin, Y., Avisdris, N., Ben-Zvi, O., Bashat, D. B., Fidon, L., Aertsen, M., Vercauteren, T., Sobotka, D., Langs, G., Alenyà, M., Villanueva, M. I., Camara, O., Fadida, B. S., Joskowicz, L., Weibin, L., Yi, L., Xuesong, L., Mazher, M., Qayyum, A., Puig, D., Kebiri, H., Zhang, Z., Xu, X., Wu, D., Liao, K., Wu, Y., Chen, J., Xu, Y., Zhao, L., Vasung, L., Menze, B., Cuadra, M. B. & Jakab, A., Aug. 2023, in: Medical Image Analysis. 88, 102833.

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  • GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows

    Pati, S., Thakur, S. P., Hamamcı, İ. E., Baid, U., Baheti, B., Bhalerao, M., Güley, O., Mouchtaris, S., Lang, D., Thermos, S., Gotkowski, K., González, C., Grenko, C., Getka, A., Edwards, B., Sheller, M., Wu, J., Karkada, D., Panchumarthy, R. & Ahluwalia, V. &22 mehr, Zou, C., Bashyam, V., Li, Y., Haghighi, B., Chitalia, R., Abousamra, S., Kurc, T. M., Gastounioti, A., Er, S., Bergman, M., Saltz, J. H., Fan, Y., Shah, P., Mukhopadhyay, A., Tsaftaris, S. A., Menze, B., Davatzikos, C., Kontos, D., Karargyris, A., Umeton, R., Mattson, P. & Bakas, S., Dez. 2023, in: Communications Engineering. 2, 1, 23.

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    Ezhov, I., Giannoni, L., Shit, S., Lange, F., Kofler, F., Menze, B., Tachtsidis, I. & Rueckert, D., 2023, Diffuse Optical Spectroscopy and Imaging IX. Contini, D., Hoshi, Y. & O'Sullivan, T. D. (Hrsg.). SPIE, 1262826. (Proceedings of SPIE - The International Society for Optical Engineering; Band 12628).

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    Buchner, J. A., Peeken, J. C., Etzel, L., Ezhov, I., Mayinger, M., Christ, S. M., Brunner, T. B., Wittig, A., Menze, B. H., Zimmer, C., Meyer, B., Guckenberger, M., Andratschke, N., El Shafie, R. A., Debus, J., Rogers, S., Riesterer, O., Schulze, K., Feldmann, H. J. & Blanck, O. &13 mehr, Zamboglou, C., Ferentinos, K., Bilger, A., Grosu, A. L., Wolff, R., Kirschke, J. S., Eitz, K. A., Combs, S. E., Bernhardt, D., Rueckert, D., Piraud, M., Wiestler, B. & Kofler, F., Nov. 2023, in: Radiotherapy and Oncology. 188, 109901.

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    Ezhov, I., Scibilia, K., Franitza, K., Steinbauer, F., Shit, S., Zimmer, L., Lipkova, J., Kofler, F., Paetzold, J. C., Canalini, L., Waldmannstetter, D., Menten, M. J., Metz, M., Wiestler, B. & Menze, B., Jan. 2023, in: Medical Image Analysis. 83, 102672.

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  • Leveraging 2D Deep Learning ImageNet-trained Models for Native 3D Medical Image Analysis

    Baheti, B., Pati, S., Menze, B. & Bakas, S., 2023, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 8th International Workshop, BrainLes 2022, Held in Conjunction with MICCAI 2022, Revised Selected Papers. Bakas, S., Baid, U., Baheti, B., Crimi, A., Malec, S., Pytlarz, M., Zenk, M. & Dorent, R. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 68-79 12 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 13769 LNCS).

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    Sekuboyina, A., Irmai, J., Shit, S., Kirschke, J., Andres, B. & Menze, B., 2023, 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023. IEEE Computer Society, (Proceedings - International Symposium on Biomedical Imaging; Band 2023-April).

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    Zhylka, A., Sollmann, N., Kofler, F., Radwan, A., De Luca, A., Gempt, J., Wiestler, B., Menze, B., Schroeder, A., Zimmer, C., Kirschke, J. S., Sunaert, S., Leemans, A., Krieg, S. M. & Pluim, J., 1 März 2023, in: American Journal of Neuroradiology. 44, 3, S. 283-290 8 S.

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    Kaushik, S. S., Bylund, M., Cozzini, C., Shanbhag, D., Petit, S. F., Wyatt, J. J., Menzel, M. I., Pirkl, C., Mehta, B., Chauhan, V., Chandrasekharan, K., Jonsson, J., Nyholm, T., Wiesinger, F. & Menze, B., 7 Okt. 2023, in: Physics in Medicine and Biology. 68, 19, 195003.

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    Prabhakar, C., Li, H. B., Paetzold, J. C., Loehr, T., Niu, C., Mühlau, M., Rueckert, D., Wiestler, B. & Menze, B., 2023, Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 - 26th International Conference, Proceedings. Greenspan, H., Greenspan, H., Madabhushi, A., Mousavi, P., Salcudean, S., Duncan, J., Syeda-Mahmood, T. & Taylor, R. (Hrsg.). Springer Science and Business Media Deutschland GmbH, S. 226-236 11 S. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Band 14227 LNCS).

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    2 Zitate (Scopus)